Gene Pput_1894 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_1894 
Symbol 
ID5191766 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp2170103 
End bp2170909 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content66% 
IMG OID640586358 
Productalpha/beta hydrolase fold 
Protein accessionYP_001267226 
Protein GI148547124 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCT TCGTCGCTGG CGGTAACGTG AGCGCCAATG GCATCCGCCA GCATTACCTG 
CGCTATGGCG GCAAGGGCCA TGCGCTGATC CTGGTGCCGG GCATCACCAG CCCAGCGATC
ACCTGGGGCT TTGTTGCCGA GCGCCTTGGG CAGTATTTCG ACACCTATGT GCTGGATGTG
CGCGGGCGCG GCTTGTCTTC AAGCGGCCCC GACCTGGACT ACGGCACCGA AGCTTGTGCT
GCGGATATTC CCGCCTTTGC CGCCGCGCTG GGCCTGGATG GCTACCATCT GGTCGGGCAC
TCGATGGGGG CGCGTTTTGC CATCCGCGCT GCCGCCCAAG GGGCGCCGGG GCTGCAGCGG
CTGGTGCTGG TCGACCCACC GGTGTCCGGG CCGGGCCGCC GCGCCTACCC GAGCAAGTTG
CCGTGGTACG TCGATTCGAT CCGCCAAGCC ACGGTTGGCA TGAGCGGCGA TGACATGCGC
GCCTACTGCG CCACCTGGAG CAACGCGCAG CTGGCCCTGC GTGCCGAGTG GCTGCACACC
TGCTACGAGC CGGCGATCGT GCGGGCCTTC GATGATTTCC ACGTGGTCGA TATCCACCAG
TACCTGCCCG CGGTGCGCCA GCCGGCATTG CTGATGGTGG CCGGGCGGGG TGGAGTGATC
GAGCCCCGTG ACATTGCTGA AATGCGCGAG CTCAAGCCGG ATATCCAGGT CGCGTACGTG
GACAACGCCG GCCACATGAT CCCCTGGGAT GACCTGGACG GTTTCTTCGC CGCCTTTGGC
GACTTCCTCG ACCACCCCCT CGTCTGA
 
Protein sequence
MSTFVAGGNV SANGIRQHYL RYGGKGHALI LVPGITSPAI TWGFVAERLG QYFDTYVLDV 
RGRGLSSSGP DLDYGTEACA ADIPAFAAAL GLDGYHLVGH SMGARFAIRA AAQGAPGLQR
LVLVDPPVSG PGRRAYPSKL PWYVDSIRQA TVGMSGDDMR AYCATWSNAQ LALRAEWLHT
CYEPAIVRAF DDFHVVDIHQ YLPAVRQPAL LMVAGRGGVI EPRDIAEMRE LKPDIQVAYV
DNAGHMIPWD DLDGFFAAFG DFLDHPLV