| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1891 |
|---|
| Symbol | |
|---|
| ID | 5195261 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | - |
|---|
| Start bp | 2167036 |
|---|
| End bp | 2167512 |
|---|
| Gene Length | 477 bp |
|---|
| Protein Length | 158 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640586355 |
|---|
| Product | MarR family transcriptional regulator |
|---|
| Protein accession | YP_001267223 |
|---|
| Protein GI | 148547121 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1846] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.784898 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGAAAA AAACCACCCC CAGCAGCGCC CCGCTCGACA ACACCCCCTA CGACGTTACC
GAACAGGTCG GGCACTTGCT GCGCAAGGCC TACCAGCGGC ACACGGCGAT TTTCCAGCAG
CAGGCCTGCG ACCCGCAGCT TACCTCGATC CAGTTCGTCA CCCTGTGCGC CCTGCGCGAC
CACGGCCCCA GCTCCCAGGC CGAACTGATC AAGGCCACCG CGGTGGACCA GGCAACCATC
CGCGGCATCG TCGAGCGCCT GAAGGCGCGC GAGCTGGTGC AGCTTTCGCC AGACCCAGGC
GACCGGCGCA AGGTCATCGT CGAACTCACC GAGAGCGGCG CGGCCTTGCT CGATGCAATG
ATCCCCTGCG CCCGGCAGAT CAGCGAACTG AGCATGGGCA GCCTGAATGC CGGTGAACGC
GTAGCCATTT TGTACCTGCT GCGCAAGATG ATCGACAGCG ACGAGAACGC GGGCTGA
|
|---|
| Protein sequence | MSKKTTPSSA PLDNTPYDVT EQVGHLLRKA YQRHTAIFQQ QACDPQLTSI QFVTLCALRD
HGPSSQAELI KATAVDQATI RGIVERLKAR ELVQLSPDPG DRRKVIVELT ESGAALLDAM
IPCARQISEL SMGSLNAGER VAILYLLRKM IDSDENAG
|
|---|
| |