| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1860 |
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| Symbol | |
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| ID | 5190946 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 2131377 |
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| End bp | 2132363 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640586326 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001267194 |
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| Protein GI | 148547092 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0547107 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGTCG TGAAGCCGTC ACCTGGAAGT GCCCAGTCCA TCCCTGCGAA TGCCAACGGC
CCGAAGTGGG ATGTCGGCGA AGCTGTCAGC CAACTTTCCT GGGACGACTT GCGGATCATT
AAAACGCTAA GTGACTGTAG CAACCGCTCC GCCACGGCCA AGAAGCTCGG CATCAATGTG
TCCACCGTCT CGCGCCGGGT CGCGCAAGTT GAGAAGACGC TTGGGGTCGC GCTTTTCGAT
CATCGCAAGG CGGGGTATCT GCTGACCGCC GAAGGCGTCG AGCTGCGTGC ACTGGCCGAG
CGCGTTGAGC TGGACATCGT CAGTGTCACC CGCAGGGTGT CCCGCGCCGG CCAAGGCCCC
CTGGGAAAGC TGCGAATCAC CACCAGCGAC TCGCTGCTGT TGTACTTTCT CACGCCGATC
ATCGCGGACT TCAAAGCCCT CAATGAGGGG ATTTCCATCG AGGTGTTGGT CGGCAACCAG
ACGTTGAGTT TGGCAAGGGA CGAGTCGGAT ATTGCGGTAC GCGCGACCAA AAAACCAACG
GACACCCTCG TGGGCCGCAA GCTCGCCAAC ATCGCGTGGG CGGCATATGG CAGCGTCAAG
CAGGCGGCGA TTACCGATCC CTTCGCTGAG GGTCAGGCAT GGGTATCCTA CTCGGGAGGC
CTGTGCGGTT TGAAGGCAAC GAGCTACGTC GAATGTCGAG TGCCCTCGGA GCATATTGCT
TACCGCACTG ATTCCGTGGC GGCAGCAAGT GCCGCTATTG CGGCGGGCCT CGGTTTTGGT
TTCCTCCCCT GCATGCTGGG CGACATCACC CCAGGTTTGG TTCGAGCCGG CCCAGTGGTG
CAGGAGCTTC AGGATGAGTT ATGGCTGCTC ACCCACCAGG ACATCAGAAA GTCCTGGCGG
GTAAAAGCAT TCATGACGTT CTGCGCGGCT GCCGTGGCGG ACCTTAAACC TCTGGTCGAA
GGTCAGCAGG CCATCCCTGC TTCCTAG
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| Protein sequence | MIVVKPSPGS AQSIPANANG PKWDVGEAVS QLSWDDLRII KTLSDCSNRS ATAKKLGINV
STVSRRVAQV EKTLGVALFD HRKAGYLLTA EGVELRALAE RVELDIVSVT RRVSRAGQGP
LGKLRITTSD SLLLYFLTPI IADFKALNEG ISIEVLVGNQ TLSLARDESD IAVRATKKPT
DTLVGRKLAN IAWAAYGSVK QAAITDPFAE GQAWVSYSGG LCGLKATSYV ECRVPSEHIA
YRTDSVAAAS AAIAAGLGFG FLPCMLGDIT PGLVRAGPVV QELQDELWLL THQDIRKSWR
VKAFMTFCAA AVADLKPLVE GQQAIPAS
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