Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_1823 |
Symbol | |
ID | 5194351 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 2094515 |
End bp | 2094781 |
Gene Length | 267 bp |
Protein Length | 88 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640586291 |
Product | cold-shock DNA-binding domain-containing protein |
Protein accession | YP_001267160 |
Protein GI | 148547058 |
COG category | [K] Transcription |
COG ID | [COG1278] Cold shock proteins |
TIGRFAM ID | [TIGR02381] cold shock domain protein CspD |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.565643 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0615675 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAGCG GTAAAGTCAA GTGGTTCAAC AATGCCAAGG GCTATGGATT CATCAATGAG GAAGGTAAAT CCGATGACCT GTTCGCCCAT TATTCCGCCA TCCGAATGGA CGGATACAAG ACCCTGAAGG CTGGCCAGGC CGTGGTATTC GACATCGTCC AGGGCCCCAA AGGCTTGCAC GCCGTTGAAA TCAAAGATGC TGCGGCCGCC GCGGCAGAGG CTGCCAGACC CGTGGGTGAG CCGCAAAGCG AAACTGCAAA AGCCTGA
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Protein sequence | MASGKVKWFN NAKGYGFINE EGKSDDLFAH YSAIRMDGYK TLKAGQAVVF DIVQGPKGLH AVEIKDAAAA AAEAARPVGE PQSETAKA
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