Gene Pput_1808 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_1808 
Symbol 
ID5192024 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp2076383 
End bp2077225 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content61% 
IMG OID640586276 
Productenoyl-CoA hydratase 
Protein accessionYP_001267145 
Protein GI148547043 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.399068 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTTTT CGCCCGCAGG AGTGCCGCCC GTGACCGAGT ACAGTGCATT AAAGGTCGAA 
CTGACCGACA GCGTCGCCCA TGTTCAGATC AATCGCCCAG AGAAGGTCAA CGCGATGAAT
GCGGCCTTCT GGGAGGAAAT CGTCGACATC TTCCAGTGGA TCGATGACAC CGATGCCGTG
CGCGCGGTGG TGATCAGCGG CGCTGGCAAG CACTTTTCCG CCGGTATCGA CCTGATGATG
CTGGCTTCGC TGGCTGGGCA GATGGGCAAG GACGTGGGCC GCAATGCACG CTTCCTGCGC
AAGACCATCC AGCGGCTGCA GGCCTCGTTC AACGCAGTGG ACACGTGCCG CAAACCCGTA
CTGGCGGCGG TTCAAGGCTA CTGCATCGGC GGCGCCATCG ACCTCATCTC GGCGTGCGAC
ATGCGCTACT GCAGCAGTGA CGCGCAGTTC TCGATCAAGG AAATCGACAT GGGTATGGCG
GCCGATGTTG GCACATTGCA ACGTTTGCCA CGCATCATTG GCGACGGCAT CATGCGGGAG
CTGGCGTTTA CCGGGCGCAA TGTCGAGGCC GACGAGGCGC TGCGCATCGG CCTGGTCAAC
CGAGTCTATG ATGATCAGGC CGCACTGATG GACGGCGTCT TTGCCATCGC CCGCGAGATT
GCCGCAAAAT CGCCGATCGC TGTGGCCGGC ACCAAGGAAA TGCTCAGCTA CATGCGTGAC
CATCGCATCG ACGATGGCCT GGACTACATT GCCACCTGGA ACGCCGCAAT GCTGCAGTCC
GAAGACCTGC GCGTGGCTGT GGCGGCGCAC ATGAGCAAAC AGAAACCGAC GTTCGCCGAC
TGA
 
Protein sequence
MNFSPAGVPP VTEYSALKVE LTDSVAHVQI NRPEKVNAMN AAFWEEIVDI FQWIDDTDAV 
RAVVISGAGK HFSAGIDLMM LASLAGQMGK DVGRNARFLR KTIQRLQASF NAVDTCRKPV
LAAVQGYCIG GAIDLISACD MRYCSSDAQF SIKEIDMGMA ADVGTLQRLP RIIGDGIMRE
LAFTGRNVEA DEALRIGLVN RVYDDQAALM DGVFAIAREI AAKSPIAVAG TKEMLSYMRD
HRIDDGLDYI ATWNAAMLQS EDLRVAVAAH MSKQKPTFAD