| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1803 |
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| Symbol | |
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| ID | 5190934 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 2070201 |
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| End bp | 2071691 |
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| Gene Length | 1491 bp |
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| Protein Length | 496 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640586271 |
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| Product | permease for cytosine/purine, uracil, thiamine, allantoin |
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| Protein accession | YP_001267140 |
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| Protein GI | 148547038 |
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| COG category | [F] Nucleotide transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG1953] Cytosine/uracil/thiamine/allantoin permeases |
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| TIGRFAM ID | [TIGR00800] NCS1 nucleoside transporter family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.666463 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.799889 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACAGA GCAGATCGGA AGTGGTCGAG CAAGATGGCC TGTTCGAGCT GTCCGAGGGC
AGCGATGTCC TCGACAGCCC GCGCTACAAC CCCGACATAG CACCGACCAA GGTGCACCAG
CGCACCTGGA ACAAATGGCA CATCACCGCC CTGTGGGTGG GGATGTCCAT CTGCGTACCC
ACCTACACCC TCGGCGGTGT CCTTACCGCC TACTTCGGCC TCAGTGTTGG CGAAGCGCTG
CTGGCGATCC TGCTGGCCAA CGTTATCGTG CTGATACCGC TTACCCTCAA TGCCTTTCCC
GGTACCAAGT ACGGCATCCC GTTTCCGGTG CTGCTGCGTT CGTCGTTCGG CATTCTCGGC
TCCAACGTAC CGTGCCTGAT CCGCGCGGTG GTGGCCTGTG GTTGGTTCGG TATCCAGACC
ATGTTCGGCG GGCTGGCCAT TCACCTGTTC CTGGGTTCGG TCTTCGACGG CTGGAAGGCG
CTGGGCGGGA CAGGCGAGGT GATTGGCTTC ATGATCTTCT GGTGCCTGAA CCTGTGGGTG
GTGCTGCGCG GCGCCGAGTC GATCAAGTGG CTGGAAACGC TGTCGGCACC GCTGCTGGTG
GCGGTGGGCG TCGGTCTGCT GTTCTGGGCC TTGCCACACA TGTCGATGAC CGAACTGTTG
GCACAGCCGC CCAAGCGCCC AGAAGGGGCG AGCGTGGTCA GTTACTTCTG CGCCGGGCTT
ACGGCCATGG TCGGCTTCTG GGCCACACTG TCGCTGAACA TTCCCGACTT CAGCCGCTAC
GCCCGCAGCC AGAAGGACCA GATTCTCGGG CAGATCTTCG GCCTGCCGCT GACCATGTTC
CTGTTTGCTG CGCTGGGTGT GGTGCTGACC GCCGCCTCGG CGTCGCTGGT GGGCGAGACG
GTGTCCGACC CGGTCAGCCT GATCGGCAAG ATTCAAAGCC CGTTCTGGGT AGCCCTGGCC
ATGGCGCTGA TCGTGATTGC CACGCTGTCG ACCAACACCG CGGCGAACAT CGTGTCGCCC
ACCAATGACT TCCAGAACAT TGCCCCACGC CTGATCGGCC GAAGCCGCGC GGTATGGCTG
ACCGGCTTTA TCGGCCTGGC GCTGATGGGG CATGAACTGC TGAAGAAACT GGGCCTGATT
GTCTCCGACC TTAGCCTGGA GAGCGTGTAT TCCAACTGGC TGCTGGGCTA TTCCAGCTTG
TTGGGGCCCA TTGCCGGCAT CATGGTGGTG GACTACTTCC TGATCCGTCG GCAGAAGCTG
GACCTGGCCG GGCTATACCG CGACGACGTG TATCCCGCGT GGAACTGGGC CGGTTTTGCC
GCCTTCGCCT TGCCAGTAGG GCTGACGGTA ATGGCGATTG GCAACAGCAG TTTCAGCTGG
TTCTACGACT ATGGCTGGTT CACCGGCTCG TTGCTGGGCG GTGCACTGTA CGCCGCGCTT
GGCGGTTTGG CGGCACGCAA CCCGGTGCGG TTGGTCAAAC CCTTGCCTTG A
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| Protein sequence | MQQSRSEVVE QDGLFELSEG SDVLDSPRYN PDIAPTKVHQ RTWNKWHITA LWVGMSICVP
TYTLGGVLTA YFGLSVGEAL LAILLANVIV LIPLTLNAFP GTKYGIPFPV LLRSSFGILG
SNVPCLIRAV VACGWFGIQT MFGGLAIHLF LGSVFDGWKA LGGTGEVIGF MIFWCLNLWV
VLRGAESIKW LETLSAPLLV AVGVGLLFWA LPHMSMTELL AQPPKRPEGA SVVSYFCAGL
TAMVGFWATL SLNIPDFSRY ARSQKDQILG QIFGLPLTMF LFAALGVVLT AASASLVGET
VSDPVSLIGK IQSPFWVALA MALIVIATLS TNTAANIVSP TNDFQNIAPR LIGRSRAVWL
TGFIGLALMG HELLKKLGLI VSDLSLESVY SNWLLGYSSL LGPIAGIMVV DYFLIRRQKL
DLAGLYRDDV YPAWNWAGFA AFALPVGLTV MAIGNSSFSW FYDYGWFTGS LLGGALYAAL
GGLAARNPVR LVKPLP
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