| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1800 |
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| Symbol | |
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| ID | 5190419 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 2065593 |
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| End bp | 2066867 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640586268 |
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| Product | dihydropyrimidine dehydrogenase |
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| Protein accession | YP_001267137 |
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| Protein GI | 148547035 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0167] Dihydroorotate dehydrogenase |
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| TIGRFAM ID | [TIGR01037] dihydroorotate dehydrogenase (subfamily 1) family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.287074 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.942647 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGACT TGTCTATCGT ATTTGCCGGC ATCAAGGCAC CCAACCCCTT CTGGCTGGCC
TCCGCACCGC CAACCGACAA GGCCTACAAC GTGGTCCGCG CCTTCGAGGC CGGCTGGGGC
GGCGTGGTCT GGAAGACCCT GGGCGAAGAC CCTGCGGCGG TCAACGTGTC GTCGCGCTAC
TCGGCGCACT ATGGCCCCAA CCGTCAGGTA CAGGGGATCA ACAATATCGA GTTGATCACC
GACCGCTCAC TGGACATCAA CCTGCGTGAA ATTACCCAGG TAAAGAAGGA CTGGCCCGAC
CGCGCACTGA TTGTGTCGCT GATGGTGCCG TGCATAGAGG AATCGTGGAA GTTCATCCTG
CCGCTGGTGG AAGCCACCGG GGCTGATGGC ATCGAGCTGA ACTTCGGTTG CCCGCACGGA
ATGCCGGAGC GCGGCATGGG GGCGGCCGTC GGCCAGGTGC CGGAATATGT GGAAATGGTC
ACCCGCTGGT GCAAGACGTA CTGCGCGCTG CCGGTGATCG TGAAGCTTAC GCCAAACATC
ACCGATATCC GCCAGTCGGC CCGCGCCGCG CACCGGGGCG GGGCCGATGC GGTGTCGTTG
ATCAACACCA TCAACTCCAT CACCAGCGTC GACCTGGACC GCATGGTGGC CCACCCGATT
GTCGGAGACC AGAGCACCCA TGGCGGTTAC TGCGGTTCGG CAGTGAAGCC GATTGCCTTG
AACATGGTGG CGGAAATCGC CCGCGACCCG GAAACGCGGG GCTTGCCGAT TTGTGGCATT
GGCGGCATCG GCAACTGGCG TGACGCCGCC GAATTCATGG CCCTGGGCAG TGGCGCCGTG
CAGGTGTGCA CGGCAGCGAT GCTGCATGGC TTCCGTATCG TCGAGGACAT GCAGGACGGC
CTGGCACGCT GGATGGACCA GCATGGGCAT GCCACTATCG AAGCGTTCCG CGGGCAGGCG
GTGGGGCATA CCACCGACTG GAAATACCTG GACATCAACT ACAAGTCGGT CGCGCACATT
GACCAGGAGG CGTGCATTGG CTGCGGGCGC TGCCACATTG CGTGCGAGGA CACCTCGCAC
CAGGCGATTG CCAGCACGCT GAAGGCTGAC GGCACGCATG CCTACAGTGT GATCGAAGAG
GAGTGCGTAG GCTGCAACCT GTGCCAGATC ACCTGCCCGG TGGAAAACTG CATCGAAATG
GAGGCACAGG ACACCGGCAA GCCATACCTG AACTGGACGC AGGATCCGCG TAACCCCTAC
CGCGAGGCCA GTTGA
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| Protein sequence | MADLSIVFAG IKAPNPFWLA SAPPTDKAYN VVRAFEAGWG GVVWKTLGED PAAVNVSSRY
SAHYGPNRQV QGINNIELIT DRSLDINLRE ITQVKKDWPD RALIVSLMVP CIEESWKFIL
PLVEATGADG IELNFGCPHG MPERGMGAAV GQVPEYVEMV TRWCKTYCAL PVIVKLTPNI
TDIRQSARAA HRGGADAVSL INTINSITSV DLDRMVAHPI VGDQSTHGGY CGSAVKPIAL
NMVAEIARDP ETRGLPICGI GGIGNWRDAA EFMALGSGAV QVCTAAMLHG FRIVEDMQDG
LARWMDQHGH ATIEAFRGQA VGHTTDWKYL DINYKSVAHI DQEACIGCGR CHIACEDTSH
QAIASTLKAD GTHAYSVIEE ECVGCNLCQI TCPVENCIEM EAQDTGKPYL NWTQDPRNPY
REAS
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