| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1773 |
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| Symbol | |
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| ID | 5192162 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 2025809 |
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| End bp | 2026483 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640586243 |
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| Product | putative prophage repressor |
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| Protein accession | YP_001267112 |
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| Protein GI | 148547010 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0000495428 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00108243 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGCCAGCCA TGAACATGGA TAAGTGGATT GCCCTCGTTC GCGACCGGAT GGAGGAATTA
GGGCTTACCC AAGAGCAGCT TGCCGAGCGC GTAGGCGTGT CGCAAGGCAG TGTAGGACAT
TGGGTGAACA AGCGGCGCCA ACCGAAGCTC GAGTCGATGA ACCGCACTTT GGTTGAGATT
GGCATGCCCC ACTACTGCGT CCGCTTGCAA TTGCGTATTC ACGGGCAGGC TGATGGTGAA
CGTTGTGTTT CTGGGGTGGA TGACGATGAT GACGAACCCG ACCTCATGCG ATACATCGTC
TGCTTCCGTT ACCCGGTGCT GGGTTGGAGT GAGTTAGAGG CTGCAACGGC TGTAGAGCCT
GCTGTTTTCG AGCAGACTGA CTACCTGGCA CAGGGCAAGG CGTTCTGGCT AACCGTGGAA
AACGATGCCA TGAGCGCTGT CAGTGGCCGC AGTGTGCCGC AGGGCATGCG GATGCTGGTG
GACCCAGGTG TAGAGGCTGA GGCGGGGCGT TTGGTTATCG CTCGTCAGCC CGGCAAACCG
GCGATTTTCC GCGAGCTGGC CGAGGAAGGT GGGCAGCGTT ATCTGAAGGC ATTGAACAGT
AACTACCCGG CGCTGTTGTG CGAAGAGGGT TGCGAATTTC TTGGGGTGGT CGTGCGGGTG
CATGGGGCCT TTTGA
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| Protein sequence | MPAMNMDKWI ALVRDRMEEL GLTQEQLAER VGVSQGSVGH WVNKRRQPKL ESMNRTLVEI
GMPHYCVRLQ LRIHGQADGE RCVSGVDDDD DEPDLMRYIV CFRYPVLGWS ELEAATAVEP
AVFEQTDYLA QGKAFWLTVE NDAMSAVSGR SVPQGMRMLV DPGVEAEAGR LVIARQPGKP
AIFRELAEEG GQRYLKALNS NYPALLCEEG CEFLGVVVRV HGAF
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