Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_1764 |
Symbol | |
ID | 5191327 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 2018543 |
End bp | 2018932 |
Gene Length | 390 bp |
Protein Length | 129 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640586234 |
Product | helix-turn-helix domain-containing protein |
Protein accession | YP_001267104 |
Protein GI | 148547002 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.00226226 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAACGGAA TCGGTCCACG GCTGCGGGAA GAGCGTGAGC GGCTGGGTAT GACCCAGCGT GTATTTGGCG ATATCGGTGG CGTCGAGCCC AACGCTCAGG GCAAGTACGA AAGCGGTGAG CGCACGCCGC GGCTAGATTA CCTGGCGGCA TTGGCGACCC GGGGCGTGGA TGCGTTGTAT GTCCTCAGCG GCCTGCGCAC CCCGGCAGCA CACGAAGGTT TGAACACGAA TGAGTCCGGT TTGCTGGGGG CTTTTCGGAA ATTGCGGTCG GATGATCAGG CGGCGCTCTT GCACCTTTTG GGGCGGTTGG CCAACGACGC CAAGCCCCGG CAAATAGTGC GGCCTCTCAC AGTCGAACGT CAGTCGTTTC TGACGGAAGC AATGCGTTAG
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Protein sequence | MNGIGPRLRE ERERLGMTQR VFGDIGGVEP NAQGKYESGE RTPRLDYLAA LATRGVDALY VLSGLRTPAA HEGLNTNESG LLGAFRKLRS DDQAALLHLL GRLANDAKPR QIVRPLTVER QSFLTEAMR
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