Gene Pput_1764 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_1764 
Symbol 
ID5191327 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp2018543 
End bp2018932 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content61% 
IMG OID640586234 
Producthelix-turn-helix domain-containing protein 
Protein accessionYP_001267104 
Protein GI148547002 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00226226 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACGGAA TCGGTCCACG GCTGCGGGAA GAGCGTGAGC GGCTGGGTAT GACCCAGCGT 
GTATTTGGCG ATATCGGTGG CGTCGAGCCC AACGCTCAGG GCAAGTACGA AAGCGGTGAG
CGCACGCCGC GGCTAGATTA CCTGGCGGCA TTGGCGACCC GGGGCGTGGA TGCGTTGTAT
GTCCTCAGCG GCCTGCGCAC CCCGGCAGCA CACGAAGGTT TGAACACGAA TGAGTCCGGT
TTGCTGGGGG CTTTTCGGAA ATTGCGGTCG GATGATCAGG CGGCGCTCTT GCACCTTTTG
GGGCGGTTGG CCAACGACGC CAAGCCCCGG CAAATAGTGC GGCCTCTCAC AGTCGAACGT
CAGTCGTTTC TGACGGAAGC AATGCGTTAG
 
Protein sequence
MNGIGPRLRE ERERLGMTQR VFGDIGGVEP NAQGKYESGE RTPRLDYLAA LATRGVDALY 
VLSGLRTPAA HEGLNTNESG LLGAFRKLRS DDQAALLHLL GRLANDAKPR QIVRPLTVER
QSFLTEAMR