Gene Pput_1750 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_1750 
Symbol 
ID5191359 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp2002623 
End bp2003798 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content61% 
IMG OID640586220 
Producthypothetical protein 
Protein accessionYP_001267090 
Protein GI148546988 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.130488 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCCCG TTCGCCCGCT CCTACGCCGT CATCAGTTGG CCACCGCACT GGCCCAAGAC 
CTGGCCGGCG AGTCGTTGGT CGATTACAGC TCGGGCATGT TTCTGGCCGC GCCCCGGCGT
ACGGGCAAGA GCACCTTCCT CAACAACGAC TTCATACCGG AATGTGTACA GCGCGGCTGG
CTACCGGTTT ACGTCGATCT GTGGTCGGAT CGCGACGCCG CCCCTGCGCA GCTCATCAGC
GGCGCCATCG GTACTGCGCT GGCCAGATTC GAAGGCGCGC TGGCCAGGAC CGCGAAAAAG
GCCGGTATCG ACAAGATCAA CCTGCTGCGC ACCCTGAGCT GGGATTTCAC CCGCCCGCAA
CTGCCTGCGG GTACTACCCT GGCCCAGGCG CTTGCCGTGT TGCATCAAGT GTCAGGGCAG
TTGGTAGTAC TGATCATCGA CGAGGCTCAG CACGCCCTTA ACAGCGAAGA TGGCCTTAAT
GCGATGTTCG CGCTGAAAGC CGCGCGTGAC CACCTTAACC GTGGCGACCG TCCGGACGGC
TTGCGCCTGG TGTTCACGGG CTCTAGTCGC GACAAGCTGG CCAACCTGGT ACTCAAGAGC
AAGCAGCCAT TCTTTGGTGC AAGCATCACG CCATTTCCGT TGCTGGGGCG TGAATATGTC
GAATTCATCA CCGCCTTGTG GAACCGTCGC CTGGCCGACA GTAACCAGTT CAAGGTAGAG
GACCTGGCAT ACGCGTTCGA ATTGGTCGGC CGGCGCCCGG AAATGCTCAA CAAACTGTTG
GCCGAAGTCA GTGTCGGCCT GGGTGAGGCG GGCAACCTGG GTGAACTGCT GCGCAATGGG
GCGCTGAACC ATCAAGCCGG GGTGTGGAGT GACTACGAAA GCGCTTGGAA CGAACTTACG
CCGTTGCAGC AGGCCGTGCT AGAGGTCATG GCCGAGCGCA CGCTGGGCCG GCAGTCGTTT
TCCCCGTTTA CCGAGCAAAC CCTGGTTGAG GTCAGCCGCA AGCTGGAGCA GGCCCAGGCG
GTAGCCAACG TCAACACGGC AAACGTACAG AAGGCCCTCG ATGCCCTGCG CGACAAGGAG
CTGGTATGGA AGGCCAATCG TGGCGAGTAC GCGTTGGAGG ATACTTCCAT GGCCGAATGG
CTCGCCCGCG ACCAGGCAGT TGTCAGCCAC AGGTGA
 
Protein sequence
MSPVRPLLRR HQLATALAQD LAGESLVDYS SGMFLAAPRR TGKSTFLNND FIPECVQRGW 
LPVYVDLWSD RDAAPAQLIS GAIGTALARF EGALARTAKK AGIDKINLLR TLSWDFTRPQ
LPAGTTLAQA LAVLHQVSGQ LVVLIIDEAQ HALNSEDGLN AMFALKAARD HLNRGDRPDG
LRLVFTGSSR DKLANLVLKS KQPFFGASIT PFPLLGREYV EFITALWNRR LADSNQFKVE
DLAYAFELVG RRPEMLNKLL AEVSVGLGEA GNLGELLRNG ALNHQAGVWS DYESAWNELT
PLQQAVLEVM AERTLGRQSF SPFTEQTLVE VSRKLEQAQA VANVNTANVQ KALDALRDKE
LVWKANRGEY ALEDTSMAEW LARDQAVVSH R