| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1684 |
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| Symbol | |
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| ID | 5195454 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 1926050 |
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| End bp | 1928020 |
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| Gene Length | 1971 bp |
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| Protein Length | 656 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640586154 |
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| Product | ABC transporter related |
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| Protein accession | YP_001267024 |
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| Protein GI | 148546922 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component
[COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAGTCC CACTGATCGA GCTGCGCGAT ATCCGCAAAT GCTATGGCGG CGTCGATACA
CCGCGAATCG AGGTCTTGCG CGGTATCAAC CTGAGCATTC ACGCCGGTGA ATTCGTCGCC
ATTGTCGGTA CCTCCGGCTC AGGCAAGTCT ACGCTGATGA ACATCCTCGG CTGCCTGGAC
CGCCCCTCCA GTGGCGACTA CCTGTTCGCG GGTGAACAGG TGGCCAGCCT GGACAGTGAC
GCACTCGCCT GGCTGCGGCG TGAAGCCTTC GGTTTCGTGT TCCAGGGCTA TCACCTGATT
GCCTCCGGCA CCGCCCAGGA AAATGTCGAA ATGCCGGCGA TCTATGCCGG CACGCCTGCC
GCCGAGCGCC ACGCACGCGC CCATGCCCTG CTGACCCGCC TGGGCCTGGC CGAACGTACC
GGTAATCGCC CGCACCAGTT GTCCGGCGGC CAGCAACAAC GCGTATCGAT AGCCCGCGCG
CTGATGAACG GTGGCCACAT CATTCTGGCA GACGAACCCA CCGGCGCCCT CGACAGCCGC
AGCGGTACCG AAGTCATGGC CCTGCTCGAC GAACTGGCCA GCCAGGGCCA TGTGGTGATC
CTCATCACCC ACGACCGGGA AGTCGCCGCA CGGGCCAAGC GCATTATCGA AATCCGCGAT
GGCCAGATCA TCAGCGACCA GGCCCAGCCT GAGCCACTGC CCGCTGCGCA CCCTGAGGTC
GACGTGCTGC AGGCCGTCGA CCTGCGCCAG CGCCTGAACG ACGGCAGCGA GCACAACGGT
GCCTGGAAAG GCGAACTGCT GGACGCCGTC AAGGCGGCGT GGAGGGTGAT GTGGATCAAC
CGCTTCCGCA CCGCACTGAC GTTGCTGGGC ATCATCATCG GCGTGGCGTC GGTGGTGGTC
ATGCTGGCAG TGGGTGAAGG CAGCAAGCGC CAGGTCATGG CGCAGATGGG CGCCTTCGGC
TCCAACATCA TCTACCTCAA CGGCAAGCCA CCCGCCCCCA GGGCGCCGGA AGGCATCATC
ACCCTGGACG ACACCCGCGC CATCGCTACC CTGCCCCAGG TGCGCATGAT CATGCCCGTC
AATGGCGGCA AGGCCGGTGT GCGCTATGGC AACCAGGACC TGAAGCTCTA TGTCGGCGGC
TCCAACACCT ACTTCCCGCA GATATTCAAC TGGCCAGTGG CGCAGGGGAG TTTCTTCACC
GAGGCCGACG AAGCCGCCGG CGCCGCAGTG GCAGTGATCG GCGAAAAGAC CCGGGAAAAA
CTGTTTGCCG ACCGCAACCC GGTGGGCCAG TACATTCTCA TCGAGAACGC ACCGTTCCAG
GTCATCGGGG TGCTGGCCGG CAAGGGCGCC AGCTCTGGCG ACCAGGATGC CGACGCCCGA
GTGATGGTGC CCTACACCAC CGCCAGCGTG CGCCTGTTCG GCAACCAGGC CCCGGAATAC
GTGGTGATCG CCGCCGCAGA TGCGCGCCAG GTGAAGCAGA CCGAGCAGGT CATCGACCAG
TTGCTGCTGA AACTGCACAA CGGCGTAACC GACTTCGAAC TGACCAACAA TGCGGCCATG
ATCCAGGCCG AAGCCAGGAC GCAGAACGCG CTGTCGCTGA TGCTGGGCGC CATTGCCGCC
ATTTCGCTGC TGGTGGGCGG CATCGGGGTA ATGAACATCA TGCTGATGAC CGTGCGCGAG
CGCACACGGG AAATTGGTAT CCGCATGGCC ACCGGCGCGC GCCAGCGCGA CATCCTGCGC
CAGTTCCTTA CTGAAGCCGT GATGCTGACG ATGGTCGGCG GCGTCAGCGG CATCGCCCTG
GCATTACTGA TCGGCGGCGC CCTGAGCCTG GGCCAGGTCG CCGTCGCCTT CTCGCTGCCC
GCCGCCATCG GTGCCTTCGC CTGCGCCGTG GTCACCGGTA TCGCGTTCGG CTTCATGCCC
GCCCGCAAGG CTGCACGGCT CGACCCGGTG GCCGCCCTTA CCAGCGTATG A
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| Protein sequence | MPVPLIELRD IRKCYGGVDT PRIEVLRGIN LSIHAGEFVA IVGTSGSGKS TLMNILGCLD
RPSSGDYLFA GEQVASLDSD ALAWLRREAF GFVFQGYHLI ASGTAQENVE MPAIYAGTPA
AERHARAHAL LTRLGLAERT GNRPHQLSGG QQQRVSIARA LMNGGHIILA DEPTGALDSR
SGTEVMALLD ELASQGHVVI LITHDREVAA RAKRIIEIRD GQIISDQAQP EPLPAAHPEV
DVLQAVDLRQ RLNDGSEHNG AWKGELLDAV KAAWRVMWIN RFRTALTLLG IIIGVASVVV
MLAVGEGSKR QVMAQMGAFG SNIIYLNGKP PAPRAPEGII TLDDTRAIAT LPQVRMIMPV
NGGKAGVRYG NQDLKLYVGG SNTYFPQIFN WPVAQGSFFT EADEAAGAAV AVIGEKTREK
LFADRNPVGQ YILIENAPFQ VIGVLAGKGA SSGDQDADAR VMVPYTTASV RLFGNQAPEY
VVIAAADARQ VKQTEQVIDQ LLLKLHNGVT DFELTNNAAM IQAEARTQNA LSLMLGAIAA
ISLLVGGIGV MNIMLMTVRE RTREIGIRMA TGARQRDILR QFLTEAVMLT MVGGVSGIAL
ALLIGGALSL GQVAVAFSLP AAIGAFACAV VTGIAFGFMP ARKAARLDPV AALTSV
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