Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_1615 |
Symbol | |
ID | 5193522 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 1806165 |
End bp | 1807106 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640586085 |
Product | cytochrome c oxidase, cbb3-type, subunit III |
Protein accession | YP_001266955 |
Protein GI | 148546853 |
COG category | [C] Energy production and conversion |
COG ID | [COG2010] Cytochrome c, mono- and diheme variants |
TIGRFAM ID | [TIGR00782] cytochrome c oxidase, cbb3-type, subunit III |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0748863 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0271548 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACCT TCTGGAGTAC GTACATCAGC GTACTGACCA TCGGTAGCCT GATTGGCCTG ACCTGGCTAC TGCTCGCCAC GCGCAAGGGC CAGAGCAACA ACACCACCGA CGAGACCATG GGCCACAGCT TCGACGGTAT CGAGGAGTAC GACAACCCGC TGCCCAAGTG GTGGTTCTGG CTGTTCGTTG GCACCTTGGC GTTCTCGGTC GGCTACCTGA TCCTCTACCC GGGCCTGGGC AACTGGAAAG GCATCCTGCC GGGCTATGAA AATGGCTGGA CTGGCGCCAA CGAATGGCAG AAGGAAATGG ACAAGGCCGA TGCCAGGTTC GGTCCGATCT TCGCCAAATA CGCCGCCATG CCCGTAGAAG AAGTGGCGAA GGACCCGCAG GCGCTGAAAA TGGGCAGCCG CCTGTTCGCC TCCAACTGCT CGGTGTGCCA CGGTTCCGAC GCCAAGGGCG CCTTCGGTTT CCCCAACCTC ACCGACAATG ACTGGCGCTG GGGCGGCGAT CCGGAAACCA TCAAGACCAC CATCATGAGC GGTCGCCATG GCGTGATGCC GGCCTGGGCC GAAGTGATCG GTGACCAGGG CGTGGCCGAC GTGGCTGCGT TCGTGGTCAG CAAACTCGAT GGCCGCACAC TGCCTGAGGG GGCGAAGGCC AATGTGGAGA ACGGGCAGAA GATCTTCGCA GCCAACTGCG TGGCCTGCCA CGGGCCGGAA GGCAAAGGTA CGCCCGCCAT GGGCGCACCG AACCTGACCC ACCCGCAGGC GTTCATCTAT GGCTCGAGCT TTGCCCAGCT GCAGCAGACC ATTCGTTATG GTCGCCAAGG GCAAATGCCG GCGCAGGCCG AGATCCAAGG GAATGACAAG GTGCACCTGC TGGCGGCTTA TGTGTATAGC CTGTCGCAGG ATGGTTCGGC TGAGACCGTG ACGGCCAAGT GA
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Protein sequence | MTTFWSTYIS VLTIGSLIGL TWLLLATRKG QSNNTTDETM GHSFDGIEEY DNPLPKWWFW LFVGTLAFSV GYLILYPGLG NWKGILPGYE NGWTGANEWQ KEMDKADARF GPIFAKYAAM PVEEVAKDPQ ALKMGSRLFA SNCSVCHGSD AKGAFGFPNL TDNDWRWGGD PETIKTTIMS GRHGVMPAWA EVIGDQGVAD VAAFVVSKLD GRTLPEGAKA NVENGQKIFA ANCVACHGPE GKGTPAMGAP NLTHPQAFIY GSSFAQLQQT IRYGRQGQMP AQAEIQGNDK VHLLAAYVYS LSQDGSAETV TAK
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