| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1610 |
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| Symbol | |
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| ID | 5192218 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 1802357 |
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| End bp | 1803334 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640586080 |
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| Product | cytochrome c oxidase, cbb3-type, subunit III |
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| Protein accession | YP_001266950 |
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| Protein GI | 148546848 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2010] Cytochrome c, mono- and diheme variants |
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| TIGRFAM ID | [TIGR00782] cytochrome c oxidase, cbb3-type, subunit III |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00269268 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0066634 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACAACCT TCTGGAGTCT GTACGTTACC GTCCTGACCC TGGGCACCAT CTTCTCGTTG
ACCTGGCTGC TGCTGTCGAC CCGCAAGGGC CAGCGCGAAG AGGTTACCGA CGAAACCGTC
GGGCATGCCT TCGATGGCAT CGAGGAATAC GACAACCCGC TGCCGAAATG GTGGTTCTGG
CTGTTCGTCG GCACCATCAT CTTTGCCCTC GGCTACCTGG TGCTGTACCC GGGCCTGGGC
AACTGGAAAG GCATCCTGCC GGGCTATTCG TACCTGGATA ACGACAAGCA GACCGAGTTT
TCCAACGGCC AGCCGGGCTG GACCGGCGTG CACGAATGGG AAAAGGAAAT GGCCAAGGCC
GACGCCCGCT TCGGGCCGAT CTTCGCCAAG TTCGCGGCCA TGCCGATCGA AGAAGTGGCC
AAGGACCCAC AGGCATTGAA AATGGGTGCG CGGCTGTTCG CCTCCAACTG TTCGGTGTGC
CACGGCTCCG ACGCCAAGGG CGCCTTCGGC TTCCCCAACC TGACCGACAA CGACTGGCGC
TGGGGCGGCG AACCGGACAC CATCAAGACC ACCATCATGA GCGGTCGCCA TGGCGTGATG
CCGGCCTGGG CCGAAGTGAT CGGTGACCAG GGCGTGGCCG ACGTGGCTGC GTTCGTGGTC
AGCAAACTCG ATGGCCGCAC ACTGCCTGAG GGGGCGAAGG CCAATGTGGA GAACGGGCAG
AAGATCTTCG CAGCCAACTG CGTGGCCTGC CACGGGCCGG AAGGCAAAGG CACGCCCGCC
ATGGGCGCAC CGAACCTGAC CCACCCGCAG GCGTTCATCT ACGGCTCGAG CTTTGCCCAG
CTGCAGCAGA CCATTCGTTA TGGCCGCCAG GGGCAGATGC CGGCCCAGGA ACAGCTGCAG
GGCAACGACA AGGTGCACTT GCTGGCGGCT TATGTGTACA GCCTGTCGCA CCAGGCTGAG
CCGGCCAAGG CTGAGTAA
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| Protein sequence | MTTFWSLYVT VLTLGTIFSL TWLLLSTRKG QREEVTDETV GHAFDGIEEY DNPLPKWWFW
LFVGTIIFAL GYLVLYPGLG NWKGILPGYS YLDNDKQTEF SNGQPGWTGV HEWEKEMAKA
DARFGPIFAK FAAMPIEEVA KDPQALKMGA RLFASNCSVC HGSDAKGAFG FPNLTDNDWR
WGGEPDTIKT TIMSGRHGVM PAWAEVIGDQ GVADVAAFVV SKLDGRTLPE GAKANVENGQ
KIFAANCVAC HGPEGKGTPA MGAPNLTHPQ AFIYGSSFAQ LQQTIRYGRQ GQMPAQEQLQ
GNDKVHLLAA YVYSLSHQAE PAKAE
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