Gene Pput_1608 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_1608 
Symbol 
ID5192239 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp1800099 
End bp1800629 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content62% 
IMG OID640586078 
Producthypothetical protein 
Protein accessionYP_001266948 
Protein GI148546846 
COG category[S] Function unknown 
COG ID[COG3198] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.148481 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0232786 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGCCG CCACCGCCGC CAGCCCCTGG TACAAGCACC TCTGGCCCTG GATCATCATC 
GGCATTCTCA CCACCTCGGT GTGCCTGAGC CTGACCATGG TCAGCATCGC TGTGCACAAC
CCGGACAACC TGGTGAATGA CAACTACTAC GAGGCCGGCA AGGGCATCAA CCGCTCGCTG
GACCGCGAGC TGCTGGCGCA GCAGCTTGGC CTGAAAGCCA GCGTGCATCT GGACGAACTG
ACCGGCGAAG TGGACCTGCG CCTGACCGGT AGCAGTGGCC CGCAAAACCT GGAGCTGAAC
CTGATTTCGC CAACCCAGCC AGAGAAGGAC CGCAAGGTGC TGCTGAGCCG TGTCGAAGCA
GGGCGCTATG TGGGACAACT GGAGGACAAG GTCGACGGGC GGCGCTTTGT GGAACTGCTG
GGCAACGAAG GGGGCCAGGT GTGGCGCCTG TTCGAAGAGG AAAAAGTGGC GCATGGTGTG
ACCTTGCAGT TGGGTGACGA AGCCCTGCAA GGCGCCGAAC ACCAACAGTA G
 
Protein sequence
MPAATAASPW YKHLWPWIII GILTTSVCLS LTMVSIAVHN PDNLVNDNYY EAGKGINRSL 
DRELLAQQLG LKASVHLDEL TGEVDLRLTG SSGPQNLELN LISPTQPEKD RKVLLSRVEA
GRYVGQLEDK VDGRRFVELL GNEGGQVWRL FEEEKVAHGV TLQLGDEALQ GAEHQQ