Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_1608 |
Symbol | |
ID | 5192239 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 1800099 |
End bp | 1800629 |
Gene Length | 531 bp |
Protein Length | 176 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640586078 |
Product | hypothetical protein |
Protein accession | YP_001266948 |
Protein GI | 148546846 |
COG category | [S] Function unknown |
COG ID | [COG3198] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.148481 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0232786 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTGCCG CCACCGCCGC CAGCCCCTGG TACAAGCACC TCTGGCCCTG GATCATCATC GGCATTCTCA CCACCTCGGT GTGCCTGAGC CTGACCATGG TCAGCATCGC TGTGCACAAC CCGGACAACC TGGTGAATGA CAACTACTAC GAGGCCGGCA AGGGCATCAA CCGCTCGCTG GACCGCGAGC TGCTGGCGCA GCAGCTTGGC CTGAAAGCCA GCGTGCATCT GGACGAACTG ACCGGCGAAG TGGACCTGCG CCTGACCGGT AGCAGTGGCC CGCAAAACCT GGAGCTGAAC CTGATTTCGC CAACCCAGCC AGAGAAGGAC CGCAAGGTGC TGCTGAGCCG TGTCGAAGCA GGGCGCTATG TGGGACAACT GGAGGACAAG GTCGACGGGC GGCGCTTTGT GGAACTGCTG GGCAACGAAG GGGGCCAGGT GTGGCGCCTG TTCGAAGAGG AAAAAGTGGC GCATGGTGTG ACCTTGCAGT TGGGTGACGA AGCCCTGCAA GGCGCCGAAC ACCAACAGTA G
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Protein sequence | MPAATAASPW YKHLWPWIII GILTTSVCLS LTMVSIAVHN PDNLVNDNYY EAGKGINRSL DRELLAQQLG LKASVHLDEL TGEVDLRLTG SSGPQNLELN LISPTQPEKD RKVLLSRVEA GRYVGQLEDK VDGRRFVELL GNEGGQVWRL FEEEKVAHGV TLQLGDEALQ GAEHQQ
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