Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_1599 |
Symbol | |
ID | 5194226 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 1790111 |
End bp | 1792189 |
Gene Length | 2079 bp |
Protein Length | 692 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640586069 |
Product | DNA polymerase III subunits gamma and tau |
Protein accession | YP_001266939 |
Protein GI | 148546837 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2812] DNA polymerase III, gamma/tau subunits |
TIGRFAM ID | [TIGR02397] DNA polymerase III, subunit gamma and tau |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0852408 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTTATC AGGTTCTTGC ACGAAAATGG CGTCCGCGCT CGTTCCGCGA AATGGTCGGC CAGACCCATG TGCTCAAGGC CTTGATCAAT GCCTTGGACA ACCAGCGCCT GCACCATGCC TACCTGTTCA CCGGTACCCG CGGCGTGGGC AAGACGACCA TCGCCCGTAT TATCGCCAAG TGCCTGAACT GTGAAACCGG CATCACCTCC ACGCCCTGTG GCACCTGTTC GGTGTGCCGT GAAATCGACG AAGGCCGTTT CGTCGACCTG ATCGAGATCG ACGCCGCCAG CCGTACCAAG GTCGAGGACA CTCGCGAACT GCTCGATAAC GTGCAGTACG CCCCCAGCCG TGGGCGCTTC AAGGTCTACC TGATCGACGA AGTGCACATG CTCTCGACCC ACTCGTTCAA CGCCTTGCTC AAGACGCTGG AAGAGCCACC GCCCTACGTC AAGTTCATCC TCGCCACCAC CGATCCGCAG AAGCTGCCGG CCACTATCCT GTCGCGCTGC CTGCAGTTCT CGTTGAAGAA CATGAGCCCG GAGCGGGTGG TGGAGCACCT CAGCCACGTA CTGGCCGCCG AAAATGTGCC GTTCGAGGAA GATGCCCTGT GGCTGCTGGG CCGTGCGGCC GATGGTTCCA TGCGTGATGC CATGAGCCTG ACCGACCAGG CCATCGCCTT TGGTGAAGGC AAGGTACTGG CCGCCGATGT ACGTGCCATG TTGGGTAGCC TCGACCATGG CCAGGTGTAT GGGGTCTTGC AGGCACTGCT CGAAGGCGAT GCCAGGGCTT TGCTGGAGGC CGTGCGTAAT CTGGCCGAGC AAGGGCCGGA CTGGTCGGGC GTTCTGGCCG AAATGCTCAA TGTGCTGCAC CGTGTAGCCA TTGCCCAGGC GCTGCCCGAA GCGGTAGACA ACGGCCAGGG TGATCGCGAG CGGGTATTGG CGCTGGCTTC GGCGCTGCCG GCCGAGGATG TGCAGTTTTA TTATCAGATG GGCCTGATTG GCCGCCGTGA TCTGCCCCTT GCGCCGGATC CGCGCGGTGG GTTCGAGATG GTGCTGCTGC GCATGCTGGC GTTCCGCCCG GCAGACACGG ACGATGCACC GAAGCCGGTG CTAAAGCCAA CGGGGATCAG CCAGGCCACA GCTGATCCTG CAGGGCAGGT GGCAGCCGCG GCGCCGGTCG CGCTTTCATC GCCTGTCGCG GCTGTGCCGG CGGAGCCTGT AGCGCAAGCC CCGCAGCTGG AGGTGCCTGC ACCCGCGACG GCTGATCATG AGCCGGAGGC CGAGGCAGAT GTTGAGCTGA AGGCCGAAGC CGAGGCCATC TCCGTACCTG AGCCTGTTGC CGAAGTGGTC GACTTGCCGT GGGAAGAGCC TGCCGTTTTA CCCGCGCCGT TAGCGGCTGA ACCCGCGCCT GAACCGGCAC CTGCCGAGCC CGAGCCTGTT GCCCCGGTGG CGCCCCCACA GGCCACCCCG GCACACGACG AGCCGCCTTT CGACCCGTCT GCCTACGCTG CCGTGGGGAT GGAGCGCGAC GATGAGCCGC CGCTTGACGA AGACTATTAC GGCGGCGAAA GCGATCCGGC AGGCTTCAGC TACCTGGACG AGCTGGCCGA ACATGTTCAG GAAGACGTGT CCAAACCGGC GGCCGAACCG TTGCCGGCAG CCAAACCGGC CACCGGTCTG GCCCTGCAAT GGCTGGAATT ATTCCCACAG TTGCCTGTGT CCGGGATGAC AGGCAACATC GCGGCAAACT GTACGCTGAT TGCCGCCGAT GGCGACGACT GGTTGCTGCA TCTGGACCCG GGCCAGGGTG CGTTGTTCAA CGCCACCCAG CAGCGGCGCC TGAACGAAGC GCTCAACCAG CACTTGGGGC GCACGCTGAA CCTGCGCATC GAGCTGATCC TGCCCGAGCA GGAAACCCCG GCTCAGGCCG CAGCGCGCAA GCGTGCCGAG CGCCAGCAGG ACGCCGTCGC GTCGATCGAG CAGGATCCGT TGATCCAGCA GATGATCAAG TTGTTCGGCG CCAAGGTGCG GCAGGATACT ATTGAGCCTG TAGAAGCCCT GGCCAGTCAG GGCCAGTAA
|
Protein sequence | MSYQVLARKW RPRSFREMVG QTHVLKALIN ALDNQRLHHA YLFTGTRGVG KTTIARIIAK CLNCETGITS TPCGTCSVCR EIDEGRFVDL IEIDAASRTK VEDTRELLDN VQYAPSRGRF KVYLIDEVHM LSTHSFNALL KTLEEPPPYV KFILATTDPQ KLPATILSRC LQFSLKNMSP ERVVEHLSHV LAAENVPFEE DALWLLGRAA DGSMRDAMSL TDQAIAFGEG KVLAADVRAM LGSLDHGQVY GVLQALLEGD ARALLEAVRN LAEQGPDWSG VLAEMLNVLH RVAIAQALPE AVDNGQGDRE RVLALASALP AEDVQFYYQM GLIGRRDLPL APDPRGGFEM VLLRMLAFRP ADTDDAPKPV LKPTGISQAT ADPAGQVAAA APVALSSPVA AVPAEPVAQA PQLEVPAPAT ADHEPEAEAD VELKAEAEAI SVPEPVAEVV DLPWEEPAVL PAPLAAEPAP EPAPAEPEPV APVAPPQATP AHDEPPFDPS AYAAVGMERD DEPPLDEDYY GGESDPAGFS YLDELAEHVQ EDVSKPAAEP LPAAKPATGL ALQWLELFPQ LPVSGMTGNI AANCTLIAAD GDDWLLHLDP GQGALFNATQ QRRLNEALNQ HLGRTLNLRI ELILPEQETP AQAAARKRAE RQQDAVASIE QDPLIQQMIK LFGAKVRQDT IEPVEALASQ GQ
|
| |