Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_1588 |
Symbol | |
ID | 5193585 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 1773521 |
End bp | 1774366 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640586057 |
Product | xanthine dehydrogenase accessory protein XdhC |
Protein accession | YP_001266928 |
Protein GI | 148546826 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1975] Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family |
TIGRFAM ID | [TIGR02964] xanthine dehydrogenase accessory protein XdhC |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.613466 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACCAAT GGATCAACGC CCTCGCCGAC CACCAGTCCC GTGGCGAAGC GTGCGTGCTG GTGACCATCA TCGAGGAACG CGGCTCGACC CCGCGCAATG CCGGCTCGAA GATGGTGGTC AGCGCCAGCG GTCTGTTCGA CACCATCGGC GGCGGCCACC TGGAATACAA GGCGCTGCAC ATCGCCCGGC AAATGCTCGA AGCGCAGCGC ACCACGCCGC ACCTTGAGCG CTTCAGCCTC GGCGCCAGCC TGGGCCAGTG CTGCGGCGGC GTGACCGTGC TGCTGTTCGA ACCCATGGCC GCCGTGCAGG CTCAGATCGC CGTGTTCGGC GCGGGCCATG TCGGCAGGGC TCTGGTACCC TTGCTCGCCG CGCTCCCCTG CCGGGTGCGC TGGATCGACT CGCGTGAACA GGAATTCCCC GAGCTCATCC CCAACGGGGT GACCAAGGTG GTCAGTGAAG AGCCGGTCGA CGAAGTCGCA GACCTACCAC CCGGCAGCTA CTGCATCGTC ATGACCCACA ACCACCAGCT CGACCTGGAA CTGACCGCCG CCATTCTCAA GCGCAACGAT TTCACCTGGT TCGGCCTAAT CGGCTCGAAG ACCAAACGGG TCAAGTTCGA GCACCGCCTA CGCGAGCGAG GCTTCGACGA GGCCGTCATG GCACGCATGC GCTGCCCGAT GGGCCTGGCC GAGGTCAAGG GCAAGCTGCC CATCGAGATC GCCGTGTCTA TCGCCGGTGA AATCATTGCC ACTTACAACG CCTGCTTCGG CCAGCACGAC GCTGCCGCCA ATGCCGGCCC CATTGCCCAA TTGCTGCCGC CCTCCCGCCG CAGCCAAGCC ATTTGA
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Protein sequence | MHQWINALAD HQSRGEACVL VTIIEERGST PRNAGSKMVV SASGLFDTIG GGHLEYKALH IARQMLEAQR TTPHLERFSL GASLGQCCGG VTVLLFEPMA AVQAQIAVFG AGHVGRALVP LLAALPCRVR WIDSREQEFP ELIPNGVTKV VSEEPVDEVA DLPPGSYCIV MTHNHQLDLE LTAAILKRND FTWFGLIGSK TKRVKFEHRL RERGFDEAVM ARMRCPMGLA EVKGKLPIEI AVSIAGEIIA TYNACFGQHD AAANAGPIAQ LLPPSRRSQA I
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