| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1563 |
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| Symbol | |
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| ID | 5193623 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 1746447 |
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| End bp | 1747958 |
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| Gene Length | 1512 bp |
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| Protein Length | 503 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640586032 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001266903 |
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| Protein GI | 148546801 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2271] Sugar phosphate permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0965366 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCAACA CTTACCAGCG ATGGCTCGTA TTGGCCGTCC TGTCCTTCGC CTTGCTATTG
GTTGCGATCG ACATGACGGT CCTTTACATC GCCTTGCCCA CACTTACCCA TGCGCTCGGG
GCATCTACCT CCGAAAAGCT GTGGATCATC AACATGTATC CTCTGGTCGT CGCCGGCCTG
TTGCTGGGTG CTGGCACCTT CGGTGATCGC ATCGGCCACC AGCGATTGTT CGTGATCGGC
CTTGTGCTGT TCGGTGCGGC GTCGCTTCTG GCTGCATTCG CGCCATCTTC CGTGCTGCTA
ATCCTGGCTA GGGGCGCGCT GGGCGTCGGT GCGGCGGCCA TGATGCCGGC CACGCTGGCG
ATCATCAGTC TGACCTTCGA GGATGAGCGT GAGCGTGGTT TTGCCATCGG CGTCTGGACG
GCCGTGGCTT CAGGTGGTGC AGCGATTGGT CCGCTGATAG GGGGGGCGCT GCTCGAGCAT
TTCTGGTGGG GTTCCGTGTT TCTGATCAAC GTGCCCATCG TGCTGGTGGC CCTGGTGTTG
TCCTTGCTGC TGATCAGGAA CACGCAACAG GCCAACGCCG GGCCATGGGA CTTGCTTGGC
TCCCTTCAGG CGATGGTAGG GCTCATCAGC CTGGCGTACC TGATCAAGGA ATTCGCCAAG
CCCGAGCCCT CGCTGGTGGC GGCGCTGGGG GCGTTGGCCA TCTGCGCGGG CTTCGGCTGG
ATGTTCGTGC GCGGGCAGCG CAAGCGTGGT TTTCCGTTGA TCGACCTGCA GATTTTCCGC
AGCCCCGCGT TCTCCTCTGC GGTCATCGCC AGCCTGGCCG CGGCCGGCTG CCTGATGGGC
ATCAACCTGG TACTGAGCCA GCGCCTGCAA CTGGTTGTCG GGCTATCCCC GCTCGAGACC
GGCCTTTATT TCCTGCCCCT TTCCGTGGGA GCGATCGTGG CCGGTCCGTT AAGCGGCTGG
TTGCTGCCCA AGGTTCGTTG TGATCGGTTC CTGGTGCTCG CACTGTTGAT CTACGCCGGT
GCCATTGGCC TGTTCATGTA CAGTTTCAGC CAGTCGGTCG CCCTGCAACT GCTGCTGCTG
TTCGTCATGG GTGCTTGCGT AGGGGCGAGT ATGACCGGGG CGTCCACCAC CATCATGGCC
AGCGCGCCGC CGGAGCGAGC GGGGATGGCC GCTTCGGCCG AGGAAATTTC CTACGAGCTG
GGAGGAGGGT TGGGCATCGC CTTCATGGGT AGCCTGATGT CGGTGGTGTA CAGCCGCTCG
CTGGTCGTGC CCGAGCAGGC CGCCGACGCG GCGCGCCTGC AGGACGGGAT CGACAGCGCG
CTGGCCGCTG CCGCGCAAAT GCCCGCCCCG CTGGGGCAGG AAATCGCTGT GAATGCGCGA
TTGGCGTTCG ACCAAGCGGT GTCCTCGGTA ATGATGGCCA CCGTGGGGGT ACTCGTGGTC
ATCGCACTGT TGGTGTTTGT GAACTTTCGA AGGTATTCGA CAGTTTCTGC CGAACAGCAA
GTTTCTTCTT AA
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| Protein sequence | MFNTYQRWLV LAVLSFALLL VAIDMTVLYI ALPTLTHALG ASTSEKLWII NMYPLVVAGL
LLGAGTFGDR IGHQRLFVIG LVLFGAASLL AAFAPSSVLL ILARGALGVG AAAMMPATLA
IISLTFEDER ERGFAIGVWT AVASGGAAIG PLIGGALLEH FWWGSVFLIN VPIVLVALVL
SLLLIRNTQQ ANAGPWDLLG SLQAMVGLIS LAYLIKEFAK PEPSLVAALG ALAICAGFGW
MFVRGQRKRG FPLIDLQIFR SPAFSSAVIA SLAAAGCLMG INLVLSQRLQ LVVGLSPLET
GLYFLPLSVG AIVAGPLSGW LLPKVRCDRF LVLALLIYAG AIGLFMYSFS QSVALQLLLL
FVMGACVGAS MTGASTTIMA SAPPERAGMA ASAEEISYEL GGGLGIAFMG SLMSVVYSRS
LVVPEQAADA ARLQDGIDSA LAAAAQMPAP LGQEIAVNAR LAFDQAVSSV MMATVGVLVV
IALLVFVNFR RYSTVSAEQQ VSS
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