Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_1560 |
Symbol | |
ID | 5191018 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 1743274 |
End bp | 1744197 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640586030 |
Product | hypothetical protein |
Protein accession | YP_001266901 |
Protein GI | 148546799 |
COG category | [R] General function prediction only |
COG ID | [COG5006] Predicted permease, DMT superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACAGTT CATTGCGCCG TGGCTCGCTG GAAATGGTGG CCGCCATGCT GATTTCCGGG ACCATTGGCT GGTTCGTGCT GGTGTCCGGC CAGCCGGTGC TGGATGTGGT GTTCTGGCGC TGCGTGTTCG GTGCCGTGAC CTTGCTGGCG ATTTGCGCCG CGTTTGGCTT TCTGCGACCG GGCGTGATCA GCCGCACGGC ATTTTTGCTG GCGATTGCCA GCGGGGTGGC CATTGTCGGC AACTGGCTGC TGTTGTTCGC CTCGTACGCA CGGGCGTCGA TTGCCATCGG CACGGCGGTT TACAACGTGC AGCCGTTCAT GCTGGTGGGG CTGGCGGCGC TGTTTCTGGG CGAAAAGATC ACCTTGGCCA AGGTGACCTG GCTGAGTGTG GCGTTCCTCG GCATGCTGGC CATCGTCAGT GCCCATGGCG CTGGGCAAAG TAATGGCGAG GACTATCTGC TGGGGATTGC CCTGGCGCTG GGGGCGGCGT TTCTGTATGC GATCGCGGCC TTGATCATCA AGCGCCTGAG TGGCACGCCC CCGCACCTGA TTGCGTTGAT TCAGGTAACC ACGGGTGTGT TGCTGCTGGC GCCATGGGTC ACGCTTGGCG GGTTGCCGGT TGAAGTGCCC GCGTTGGCCA GCTTGTTGAC ACTGGGGATG GTGCACACCG GCCTGATGTA TGTGCTGTTG TACAGCGCCA TCCAGCGTTT GCCCACGGCC TTGACCGGTG CGCTGTCGTT CATTTACCCG ATTGCGGCAA TTCTTGTGGA CTGGGTGGCG TTCGGGCACC GCCTGGCGCC GCTGCAGTGG CTGGGGGTGG GGTTGATCCT GTTGGCGGCG GCGGGGATGC AGCAGGGGTG GTGGTTCCGC TCGGCGCGGC ATCCTGTAGG CGCGGGTTTA CCCGCGAAGA GGCCCGCAAG GTAG
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Protein sequence | MDSSLRRGSL EMVAAMLISG TIGWFVLVSG QPVLDVVFWR CVFGAVTLLA ICAAFGFLRP GVISRTAFLL AIASGVAIVG NWLLLFASYA RASIAIGTAV YNVQPFMLVG LAALFLGEKI TLAKVTWLSV AFLGMLAIVS AHGAGQSNGE DYLLGIALAL GAAFLYAIAA LIIKRLSGTP PHLIALIQVT TGVLLLAPWV TLGGLPVEVP ALASLLTLGM VHTGLMYVLL YSAIQRLPTA LTGALSFIYP IAAILVDWVA FGHRLAPLQW LGVGLILLAA AGMQQGWWFR SARHPVGAGL PAKRPAR
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