Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_1557 |
Symbol | |
ID | 5190948 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 1739929 |
End bp | 1740657 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640586027 |
Product | Asp/Glu racemase |
Protein accession | YP_001266898 |
Protein GI | 148546796 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4126] Hydantoin racemase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.365938 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTATTC TGATCGCCAA CGTCAACACC ACCGAAGCCA TCACCCACGC CATTGCCGAA CAGGCCCGTG CGGTGGCCGC TCCTGGTACC GAAATCGTCG GCCTCACACC CTGGTTCGGC GCCGAATCGG TGGAGGGCAA CTTCGAAAGC TACCTGGCGG CCATCGCGGT GATGGACCGG GTCCTGGCCT TTGAAGGGCC TTACGATGCC GTGATCCAGG CCGGTTATGG CGAACATGGC CGCGAAGGCC TGCAGGAACT GCTCAACGTG CCTGTGGTGG ACATTACTGA CGCCGCCGCC AGCACGGCAA TGTACCTGGG CCACGCCTAT TCCGTAGTAA CCACGCTTGA CCGCACCGTG CCATTGATCG AGGACCGCCT GAAGCTCTCG GGCCTGTATG ACCGCTGCGC CTCGGTGCGA GCCAGCGGGC TGGCGGTGCT GGAACTGGAA GCCGACCCGC TGCGGGCCGT GGAGGCGATT GTCGAGCAGG CCGAACGCGC CGTGCGTGAC GACAAGGCCG AGGTGATTTG CCTGGGTTGT GGCGGCATGG CCGGGCTGGA CGAGCAGATT CGCCAACGCA CCGGCGTGCC GGTGGTGGAT GGTGTGAGTG CAGCGGTGAC CATTGCCGAA TCGCTGGTGC GCATGGGGTT GAGCACGTCC AAAGTGCGCA CCTATGCGAC GCCACGGGCG AAGAAAGTGG TGGGCTGGCC GATGCGCTTC GGCCGCTAG
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Protein sequence | MRILIANVNT TEAITHAIAE QARAVAAPGT EIVGLTPWFG AESVEGNFES YLAAIAVMDR VLAFEGPYDA VIQAGYGEHG REGLQELLNV PVVDITDAAA STAMYLGHAY SVVTTLDRTV PLIEDRLKLS GLYDRCASVR ASGLAVLELE ADPLRAVEAI VEQAERAVRD DKAEVICLGC GGMAGLDEQI RQRTGVPVVD GVSAAVTIAE SLVRMGLSTS KVRTYATPRA KKVVGWPMRF GR
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