Gene Pput_1553 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_1553 
Symbol 
ID5190721 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp1736802 
End bp1737209 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content61% 
IMG OID640586023 
Productglutathione-dependent formaldehyde-activating, GFA 
Protein accessionYP_001266894 
Protein GI148546792 
COG category[S] Function unknown 
COG ID[COG3791] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCTGG AAAAACAAGG CACCTGCCTG TGCGGCGACA CGCGGCTGAC GGTCACCGTC 
GACAATACCC ATATCAGCGC TTGTCATTGC AGCATGTGCC GCAAGTGGAC CGGCGGCCCG
CTGCTGGTGG TGCACTGCAG CAAGCCTCCG CTGATCGAAG GGCGTGCGCC CAGCGTCTAT
GATTCGTCCG ACTGGGCCCA GCGTGCTTTC TGTGGCCGCT GTGGTACGCA CCTGTACTAC
CGGCTCAAGG CCAACGACTT CCATGCCGTG CCGGTCGGCC TGCTCGATGG CGACCAAGCC
TGGGATTTTG ACCTGCAGAT CTTCGTTGAA CGGAAGCCCG CGTGGTACTG CTTCGCCAAT
CAAACCAAGG AGCTGTCCGG TCAAGAGGTG TTCGAGCAGA ACAGCTGA
 
Protein sequence
MALEKQGTCL CGDTRLTVTV DNTHISACHC SMCRKWTGGP LLVVHCSKPP LIEGRAPSVY 
DSSDWAQRAF CGRCGTHLYY RLKANDFHAV PVGLLDGDQA WDFDLQIFVE RKPAWYCFAN
QTKELSGQEV FEQNS