Gene Pput_1528 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_1528 
Symbol 
ID5191078 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp1713133 
End bp1713921 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content59% 
IMG OID640585998 
Productchemotaxis phosphatase, CheZ 
Protein accessionYP_001266869 
Protein GI148546767 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG3143] Chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.298774 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.476992 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTCAT CACAAACGTC TTTGGGCGAG TTCGAGTCGA CCCTGAAGAA GCATGCCCAG 
GAGTTGGTCG AAAGCCTGGA GCGGGGCCGT TTCGGCGAGG CGGTGCAGTT GATTCACGAA
CTGAACCAGA CCCGCGACCG CGGCCTGTAC CAGGAAGTCG GCAAGCTGAC TCGCGAGCTG
CACAGTGCCA TCGTCAGTTT CCAGATCGAC CCCACCATGC CGCAGGCAGA AGAGGTGTCG
CAAATTACCG ACGCCACCGA GCGCCTGTCG TATGTGGTCA AGCTGACCGA GGGCGCGGCC
AACCGCACCA TGGACCTGGT CGAGGAAAGC ACACCGGTGC TCAATGAGCT GGCCAGCGAG
GCCAAGGCCC TGAGCACCGA CTGGCAGCGC TTTATGCGCC GCGAAGTGGC TGCGCCGGAA
TTCCGTGATC TGGTCAAGCG CGTCGACAGT TTCCTGACGC ACAGCGCCGA GGGTAACCGC
AAGGTTTCCG GGCACCTCAA TGACATTTTG CTGGCCCAGG ACTATCAGGA CCTGACCGGC
CAGGTGATCA AGCGCGTCAC CGCACTGGTG ACCGAGGTGG AAAGCAACCT GCTCAAGCTG
GTGCTGATGG CCAGCCAGGT CGACCGCTTT GCCGGTATAA AACATGACCA CGATCAATTG
CGTGCAGAAA AAGATCGAGA AAAACATCCG ACTCGGGGTG AAGGTCCGCA GATTCATGCC
GATAAGCGTG AAGACGTCGT GTCCGGTCAG GACGATGTCG ATGATCTGCT GTCCAGCCTT
GGTTTTTAA
 
Protein sequence
MDSSQTSLGE FESTLKKHAQ ELVESLERGR FGEAVQLIHE LNQTRDRGLY QEVGKLTREL 
HSAIVSFQID PTMPQAEEVS QITDATERLS YVVKLTEGAA NRTMDLVEES TPVLNELASE
AKALSTDWQR FMRREVAAPE FRDLVKRVDS FLTHSAEGNR KVSGHLNDIL LAQDYQDLTG
QVIKRVTALV TEVESNLLKL VLMASQVDRF AGIKHDHDQL RAEKDREKHP TRGEGPQIHA
DKREDVVSGQ DDVDDLLSSL GF