| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1526 |
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| Symbol | fliA |
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| ID | 5192080 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 1711889 |
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| End bp | 1712629 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640585996 |
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| Product | flagellar biosynthesis sigma factor |
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| Protein accession | YP_001266867 |
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| Protein GI | 148546765 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR02479] RNA polymerase sigma factor, FliA/WhiG family
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.733925 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.50237 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACGCCA GTGGCTTCAA GATGTACAGC CGGGCGGCGA AGGACGCCCA GTACGAGCTG
ATCGAACGCT ACGCCCCGCT GGTCAAGCGC ATCGCGTACC ACCTGTTGGC GCGGTTGCCG
GCCAATGTGC AAGTCGAGGA CCTGATCCAG GCCGGCATGA TCGGCCTGCT GGAAGTGGCC
AACAAATACG ACGCCAGCAA GGGCGCCAGC TTTGAGACCT ACGCCGGCAT CCGCATCCGC
GGGGCCATGC TGGACGAAGT GCGCAAAGGC GATTGGGCAC CGCGTTCGGT ACACCGCAAC
ACCCGTATGG TCAGTGATGC CATGCGTGCA GTTGAGGCCA GAACAGGCCG TGACGCTAAA
GATCATGAAG TTGCTGCCGA ACTCCAATTG AGTCTCGATG ATTACTACGG GATCTTGAAC
GATACCCTGG GCAGCCGCCT GTTCAGCTTC GACGACCTGT TGCAGGACGG CGAGCACGAA
GGGCTGCATG AGGATGGCGC CAGTGGCCAG GTCGAACCTG CGCGCGGCCT GGAGGAGGAG
CGCTTCCAGG CTGCCCTGAC CGAGGCTATC GCCAACCTGC CGGAGCGTGA GCGCCTGGTG
CTGGCGCTGT ACTACGACGA AGAGCTGAAC CTCAAGGAAA TCGGTGAGGT GCTGGGTGTC
AGCGAGTCGC GGGTCAGCCA GTTGCACAGC CAATGTGCCG CGCGCCTGCG CAGCCGCCTG
GGGGAATGGC GGGCGCGTTG A
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| Protein sequence | MNASGFKMYS RAAKDAQYEL IERYAPLVKR IAYHLLARLP ANVQVEDLIQ AGMIGLLEVA
NKYDASKGAS FETYAGIRIR GAMLDEVRKG DWAPRSVHRN TRMVSDAMRA VEARTGRDAK
DHEVAAELQL SLDDYYGILN DTLGSRLFSF DDLLQDGEHE GLHEDGASGQ VEPARGLEEE
RFQAALTEAI ANLPERERLV LALYYDEELN LKEIGEVLGV SESRVSQLHS QCAARLRSRL
GEWRAR
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