Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_1523 |
Symbol | flhA |
ID | 5194317 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 1707400 |
End bp | 1709646 |
Gene Length | 2247 bp |
Protein Length | 748 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640585993 |
Product | flagellar biosynthesis protein FlhA |
Protein accession | YP_001266864 |
Protein GI | 148546762 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1298] Flagellar biosynthesis pathway, component FlhA |
TIGRFAM ID | [TIGR01398] flagellar biosynthesis protein FlhA |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.403932 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.346987 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGTTCG CCCGGTTCAT CTTTTCGTGT GGGTGTCAGC CAAAGTTGGA AAGCTTCTTG CAAAGCCACG CCCAGGCGCC CCCTGGGCGT CAAAGTTTTG CATCAAGAGG ACTCGCGGTG GATCGCACTC AGTTAATCAG CAACGCCCGC AACAACCTGG TCGGGCTCGG CCGGGGCAAC CTGGGGGTGC CGCTGTTGCT GCTGGTGATG TTGGCAATGA TGATGTTGCC GATACCGCCG TTCCTGCTCG ACGTGTTCTT CACGTTCAAC ATCGCCCTGT CGATCGTGGT GCTGCTGGTC TGTGTATACG CCTTGCGCCC GCTCGACTTC GCTGCGTTCC CCACCATCCT GCTGGTGGCC ACGTTGTTGC GCCTGGCCCT GAACGTGGCG TCCACCCGTG TGGTCATGCT GCATGGCCAG GAGGGCCACG GCGCTGCCGG TAAAGTGATC CAGGCCTTTG GTGAGGTGGT GATCGGCGGT AACTACGTGG TCGGTGCCGT GGTGTTCGCC ATCCTCATGA TCATCAACTT CGTGGTGGTG ACCAAGGGTG CCGGGCGTAT CTCGGAAGTG AGTGCGCGTT TCACCCTCGA CGCCATGCCC GGCAAGCAGA TGGCCATCGA CGCCGACCTC AATGCCGGCC TGATCGACCA GGCCCAGGCC AAGCACCGCC GTGCCGAGGT GGCGCAGGAG GCCGAGTTCT ACGGTTCGAT GGACGGTGCC AGCAAGTTCG TGCGCGGCGA CGCCATCGCC GGCTTGCTGA TCCTGTTCAT CAACCTGATC GGTGGCATGC TCATCGGCAT GCTGCAGCAC AATATGTCGT TCAGCGAGGC CGGCAAGGTC TATGCCCTGC TGACCATTGG TGACGGTTTG GTGGCGCAAT TGCCATCACT GCTGCTGTCC ACCGCCGCCG CGATCATGGT CACCCGTGCT TCAGGCTCTG AAGACATGGG CAAGCTGATC AATCGGCAGA TGTTCGATTC GCCCAAGGCG CTGGCGGTGT CGGCGGGGCT GATGATCGTC ATGGGCCTGG TGCCGGGCAT GCCGCACATT GCCTTCCTCA GCCTCGGCCT GATGGCGGCC GGCGGCGCCT ACCTGGTGTG GAAGAAACAG CAACAGGCCA AGGTCAAAGC CCAGCAAGAG GCGCAGCGTC AGCAGGACCT GCTGCCCTCG CCACAGCGTG CGCTGGAAAC CAAGGAGCTG GGTTGGGACG ACGTCACTCC TATCGACATG ATCGGCCTGG AGGTCGGCTA TCGGCTGATC CCGCTGGTCG ATCGCAACCA GGGCGGCCAG TTGCTGGCGC GGATCAAGGG CGTGCGCAAG AAGCTGTCGC AGGACCTGGG CTTCCTGATG CCCACCGTGC ACATTCGTGA CAACCTCGAC CTGCAGCCCA GCGCCTATCG CCTGACCCTG ATGGGGGTGA TTCTGGCCGA GGCGGAGATC TACCCGGACC GCGAACTGGC AATCAACCCT GGGCAGGTGT TTGGCACCCT CAACGGTATT GCCGCGCGCG ACCCGGCGTT TGGCCTGGAA GCGGTGTGGA TCGACGTCGG CCAGCGCTCA CAGGCGCAGT CGCTGGGTTA CACCGTGGTC GATGCCAGCA CCGTGGTGGC CACCCACCTC AACCAGATTC TGCAGAAACA CTGCCACGAG CTGATCGGCC ACGAAGAGGT TCAGCAGTTG CTGCAGGTGC TGGCCAAGGC ATCGCCTAAA CTTGCAGAAG AGCTGGTGCC GGGTGTCATT TCCTTGTCGG GGCTGCTCAA GGTGCTGCAA GCCCTGTTGT CGGAACAGGT GCCAGTGCGC GATATTCGCA GTATTGCCGA GGCCATCGCG AACAACGCCG GCAAGAGTCA AGATACCGCC GCACTGGTGG CGGCGGTGCG CGTCGGATTG TGTCGCGCCA TCGTGCAAAG CATTGTCGGC GTTGAGTCGG AGCTGCCAGT GATTACCCTG GAGCCAAGGT TGGAACAGAT TTTGCTGAAT AGTCTGCAAA GGGCCGGGCA AGGTCAGGAA GACGGTGTTC TTCTGGAACC TAGCATGGCC GAGAAGCTGC AACGTTCGCT GATCGAGGCG GCCCAGCGCC AGGAAATGCA GGGTCAGCCG GCCATCCTGC TGGTCGCCGG CCCGATCCGC GCCATGTTGT CGCGTTTCGG TCGCCTGGCT GTACCGAATT TGCATGTTCT GGCGTATCAG GAAATACCTG ACAACAAGCA AGTCACCATC GTTGCCACCG TGGGCCCTAA CGGCTGA
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Protein sequence | MEFARFIFSC GCQPKLESFL QSHAQAPPGR QSFASRGLAV DRTQLISNAR NNLVGLGRGN LGVPLLLLVM LAMMMLPIPP FLLDVFFTFN IALSIVVLLV CVYALRPLDF AAFPTILLVA TLLRLALNVA STRVVMLHGQ EGHGAAGKVI QAFGEVVIGG NYVVGAVVFA ILMIINFVVV TKGAGRISEV SARFTLDAMP GKQMAIDADL NAGLIDQAQA KHRRAEVAQE AEFYGSMDGA SKFVRGDAIA GLLILFINLI GGMLIGMLQH NMSFSEAGKV YALLTIGDGL VAQLPSLLLS TAAAIMVTRA SGSEDMGKLI NRQMFDSPKA LAVSAGLMIV MGLVPGMPHI AFLSLGLMAA GGAYLVWKKQ QQAKVKAQQE AQRQQDLLPS PQRALETKEL GWDDVTPIDM IGLEVGYRLI PLVDRNQGGQ LLARIKGVRK KLSQDLGFLM PTVHIRDNLD LQPSAYRLTL MGVILAEAEI YPDRELAINP GQVFGTLNGI AARDPAFGLE AVWIDVGQRS QAQSLGYTVV DASTVVATHL NQILQKHCHE LIGHEEVQQL LQVLAKASPK LAEELVPGVI SLSGLLKVLQ ALLSEQVPVR DIRSIAEAIA NNAGKSQDTA ALVAAVRVGL CRAIVQSIVG VESELPVITL EPRLEQILLN SLQRAGQGQE DGVLLEPSMA EKLQRSLIEA AQRQEMQGQP AILLVAGPIR AMLSRFGRLA VPNLHVLAYQ EIPDNKQVTI VATVGPNG
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