Gene Pput_1523 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_1523 
SymbolflhA 
ID5194317 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp1707400 
End bp1709646 
Gene Length2247 bp 
Protein Length748 aa 
Translation table11 
GC content62% 
IMG OID640585993 
Productflagellar biosynthesis protein FlhA 
Protein accessionYP_001266864 
Protein GI148546762 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1298] Flagellar biosynthesis pathway, component FlhA 
TIGRFAM ID[TIGR01398] flagellar biosynthesis protein FlhA 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.403932 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.346987 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGTTCG CCCGGTTCAT CTTTTCGTGT GGGTGTCAGC CAAAGTTGGA AAGCTTCTTG 
CAAAGCCACG CCCAGGCGCC CCCTGGGCGT CAAAGTTTTG CATCAAGAGG ACTCGCGGTG
GATCGCACTC AGTTAATCAG CAACGCCCGC AACAACCTGG TCGGGCTCGG CCGGGGCAAC
CTGGGGGTGC CGCTGTTGCT GCTGGTGATG TTGGCAATGA TGATGTTGCC GATACCGCCG
TTCCTGCTCG ACGTGTTCTT CACGTTCAAC ATCGCCCTGT CGATCGTGGT GCTGCTGGTC
TGTGTATACG CCTTGCGCCC GCTCGACTTC GCTGCGTTCC CCACCATCCT GCTGGTGGCC
ACGTTGTTGC GCCTGGCCCT GAACGTGGCG TCCACCCGTG TGGTCATGCT GCATGGCCAG
GAGGGCCACG GCGCTGCCGG TAAAGTGATC CAGGCCTTTG GTGAGGTGGT GATCGGCGGT
AACTACGTGG TCGGTGCCGT GGTGTTCGCC ATCCTCATGA TCATCAACTT CGTGGTGGTG
ACCAAGGGTG CCGGGCGTAT CTCGGAAGTG AGTGCGCGTT TCACCCTCGA CGCCATGCCC
GGCAAGCAGA TGGCCATCGA CGCCGACCTC AATGCCGGCC TGATCGACCA GGCCCAGGCC
AAGCACCGCC GTGCCGAGGT GGCGCAGGAG GCCGAGTTCT ACGGTTCGAT GGACGGTGCC
AGCAAGTTCG TGCGCGGCGA CGCCATCGCC GGCTTGCTGA TCCTGTTCAT CAACCTGATC
GGTGGCATGC TCATCGGCAT GCTGCAGCAC AATATGTCGT TCAGCGAGGC CGGCAAGGTC
TATGCCCTGC TGACCATTGG TGACGGTTTG GTGGCGCAAT TGCCATCACT GCTGCTGTCC
ACCGCCGCCG CGATCATGGT CACCCGTGCT TCAGGCTCTG AAGACATGGG CAAGCTGATC
AATCGGCAGA TGTTCGATTC GCCCAAGGCG CTGGCGGTGT CGGCGGGGCT GATGATCGTC
ATGGGCCTGG TGCCGGGCAT GCCGCACATT GCCTTCCTCA GCCTCGGCCT GATGGCGGCC
GGCGGCGCCT ACCTGGTGTG GAAGAAACAG CAACAGGCCA AGGTCAAAGC CCAGCAAGAG
GCGCAGCGTC AGCAGGACCT GCTGCCCTCG CCACAGCGTG CGCTGGAAAC CAAGGAGCTG
GGTTGGGACG ACGTCACTCC TATCGACATG ATCGGCCTGG AGGTCGGCTA TCGGCTGATC
CCGCTGGTCG ATCGCAACCA GGGCGGCCAG TTGCTGGCGC GGATCAAGGG CGTGCGCAAG
AAGCTGTCGC AGGACCTGGG CTTCCTGATG CCCACCGTGC ACATTCGTGA CAACCTCGAC
CTGCAGCCCA GCGCCTATCG CCTGACCCTG ATGGGGGTGA TTCTGGCCGA GGCGGAGATC
TACCCGGACC GCGAACTGGC AATCAACCCT GGGCAGGTGT TTGGCACCCT CAACGGTATT
GCCGCGCGCG ACCCGGCGTT TGGCCTGGAA GCGGTGTGGA TCGACGTCGG CCAGCGCTCA
CAGGCGCAGT CGCTGGGTTA CACCGTGGTC GATGCCAGCA CCGTGGTGGC CACCCACCTC
AACCAGATTC TGCAGAAACA CTGCCACGAG CTGATCGGCC ACGAAGAGGT TCAGCAGTTG
CTGCAGGTGC TGGCCAAGGC ATCGCCTAAA CTTGCAGAAG AGCTGGTGCC GGGTGTCATT
TCCTTGTCGG GGCTGCTCAA GGTGCTGCAA GCCCTGTTGT CGGAACAGGT GCCAGTGCGC
GATATTCGCA GTATTGCCGA GGCCATCGCG AACAACGCCG GCAAGAGTCA AGATACCGCC
GCACTGGTGG CGGCGGTGCG CGTCGGATTG TGTCGCGCCA TCGTGCAAAG CATTGTCGGC
GTTGAGTCGG AGCTGCCAGT GATTACCCTG GAGCCAAGGT TGGAACAGAT TTTGCTGAAT
AGTCTGCAAA GGGCCGGGCA AGGTCAGGAA GACGGTGTTC TTCTGGAACC TAGCATGGCC
GAGAAGCTGC AACGTTCGCT GATCGAGGCG GCCCAGCGCC AGGAAATGCA GGGTCAGCCG
GCCATCCTGC TGGTCGCCGG CCCGATCCGC GCCATGTTGT CGCGTTTCGG TCGCCTGGCT
GTACCGAATT TGCATGTTCT GGCGTATCAG GAAATACCTG ACAACAAGCA AGTCACCATC
GTTGCCACCG TGGGCCCTAA CGGCTGA
 
Protein sequence
MEFARFIFSC GCQPKLESFL QSHAQAPPGR QSFASRGLAV DRTQLISNAR NNLVGLGRGN 
LGVPLLLLVM LAMMMLPIPP FLLDVFFTFN IALSIVVLLV CVYALRPLDF AAFPTILLVA
TLLRLALNVA STRVVMLHGQ EGHGAAGKVI QAFGEVVIGG NYVVGAVVFA ILMIINFVVV
TKGAGRISEV SARFTLDAMP GKQMAIDADL NAGLIDQAQA KHRRAEVAQE AEFYGSMDGA
SKFVRGDAIA GLLILFINLI GGMLIGMLQH NMSFSEAGKV YALLTIGDGL VAQLPSLLLS
TAAAIMVTRA SGSEDMGKLI NRQMFDSPKA LAVSAGLMIV MGLVPGMPHI AFLSLGLMAA
GGAYLVWKKQ QQAKVKAQQE AQRQQDLLPS PQRALETKEL GWDDVTPIDM IGLEVGYRLI
PLVDRNQGGQ LLARIKGVRK KLSQDLGFLM PTVHIRDNLD LQPSAYRLTL MGVILAEAEI
YPDRELAINP GQVFGTLNGI AARDPAFGLE AVWIDVGQRS QAQSLGYTVV DASTVVATHL
NQILQKHCHE LIGHEEVQQL LQVLAKASPK LAEELVPGVI SLSGLLKVLQ ALLSEQVPVR
DIRSIAEAIA NNAGKSQDTA ALVAAVRVGL CRAIVQSIVG VESELPVITL EPRLEQILLN
SLQRAGQGQE DGVLLEPSMA EKLQRSLIEA AQRQEMQGQP AILLVAGPIR AMLSRFGRLA
VPNLHVLAYQ EIPDNKQVTI VATVGPNG