Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_1522 |
Symbol | |
ID | 5194316 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 1706406 |
End bp | 1707209 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640585992 |
Product | GntR family transcriptional regulator |
Protein accession | YP_001266863 |
Protein GI | 148546761 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.383522 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGCTC AAAGGCATGA ACATCATGCC AATTACTCGA TTGGTAGCTC TAGTGAGTCT GTGATACCTT CGCCAGCGCT TTTGACTACA TCGCTTGACC CGGAGAACAT GGTGGCAAAC TCTCTCGATA GCTTTATCGT TCCTGACAAA CATCGCCATA AAACCGCGAT GGATTATGTA GTCGAGTCGC TACGCGAAGG CATACTTTCT GGCGCAATAG CCGAAGGTAC GGCTTTGCGC CAAGAAGAGC TAGCCTCAAA ATTCGGTTTG AGTCGAATGC CGATAAGGGA CGCCATAAGG CAGTTGGAGG CCGAAGGGCT TGTTACCTAC GAAGTCCATA AAGGGGCCTC TGTAGCGATC ATGACGATTG AAGACATTGT CGAGATCTAT GATATGCGGA TCATGGCAGA ATGCACCGCC TTGGACTTTG GTTTTGACAA CATCGTAGAA AATGATCTGG CGCAGATGTA CGAACTCATA TCTGCCATGG AGCATGCCAC CGACCCGCAC CACCTTAGCG AACTCAATGA AAAATTCCAT CACTTTCTTT ATTCAAAAGC AAAGCGCCCC AGGTTACTTG CATTAATTAA GTCCCTTCAT GACTCGGTGG ATCGCCATCT TCGTTTTTTG TTGACAAATC TCGACTATCA CAAGAAATCG CAACAGGATC ATAAAAGCAT TTTGAGCGCT TGCGCCAAGG GTGATCGCGA AGCCGCCAAG CAATTTTTAG CCGAGCACCT TGCCGAGGGA CGAGATGCAA TCGTTACGTT TCTTGAGAAG CGGCGTCGGC AGGACGTGTC ATAA
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Protein sequence | MTAQRHEHHA NYSIGSSSES VIPSPALLTT SLDPENMVAN SLDSFIVPDK HRHKTAMDYV VESLREGILS GAIAEGTALR QEELASKFGL SRMPIRDAIR QLEAEGLVTY EVHKGASVAI MTIEDIVEIY DMRIMAECTA LDFGFDNIVE NDLAQMYELI SAMEHATDPH HLSELNEKFH HFLYSKAKRP RLLALIKSLH DSVDRHLRFL LTNLDYHKKS QQDHKSILSA CAKGDREAAK QFLAEHLAEG RDAIVTFLEK RRRQDVS
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