Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_1509 |
Symbol | fliN |
ID | 5192783 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 1694938 |
End bp | 1695402 |
Gene Length | 465 bp |
Protein Length | 154 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640585979 |
Product | flagellar motor switch protein |
Protein accession | YP_001266850 |
Protein GI | 148546748 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1886] Flagellar motor switch/type III secretory pathway protein |
TIGRFAM ID | [TIGR02480] flagellar motor switch protein FliN |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.785237 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0757312 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTAACG AAAACGAGAT CACCTCCCCA GAGGACCAGG CACTGGCCGA TGAGTGGGCC GCAGCGTTGG AAGAAACCGG TTCTGCCGGC CAGGCCGACA TCGATGCACT GCTGGGCGGG GACACCGGCA GCAGCGGCCC GGGCCGCCTG CCGATGGAAG AATTCGCCAG CTCGCCGAAG CCGAACGAAA ATGTCAGCCT CGAAGGCCCT AACCTGGACG TAATCCTGGA CATCCCGGTG AACATTTCCA TGGAAGTGGG CAGCACCGAG ATCAACATTC GCAACCTGCT GCAGCTCAAC CAGGGCTCGG TGATCGAGCT CGACCGCCTG GCTGGCGAGC CGCTTGACGT GCTGGTAAAC GGCACCTTGA TCGCCCATGG CGAAGTAGTG GTGGTCAACG AAAAGTTCGG CATCCGCCTG ACCGACGTGA TCAGCCCCAG CGAACGTATC AAGAAGTTGC GCTGA
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Protein sequence | MANENEITSP EDQALADEWA AALEETGSAG QADIDALLGG DTGSSGPGRL PMEEFASSPK PNENVSLEGP NLDVILDIPV NISMEVGSTE INIRNLLQLN QGSVIELDRL AGEPLDVLVN GTLIAHGEVV VVNEKFGIRL TDVISPSERI KKLR
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