| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1496 |
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| Symbol | |
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| ID | 5191714 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 1681701 |
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| End bp | 1683056 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640585966 |
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| Product | two component, sigma54 specific, Fis family transcriptional regulator |
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| Protein accession | YP_001266837 |
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| Protein GI | 148546735 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.190196 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.699272 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAATCA AGGTGCTGCT GGTCGAGGAT GACCGCGTAT TGCGCCAGGC GCTGGGCGAT
ACCCTGGAAA TCGGCGGTTT CGCCTACCAG GCAGTGGGCA GTGCCGAAGA AGCGCTGGAG
GCCGTACTGG ATGACGCGTT CAGCCTGGTG GTCAGTGACG TCAACATGCC CGGTATGGAC
GGGCACCAGT TGCTCAGCCA GCTGCGCCGC CAGCAGCCAC AGTTGCCGGT ACTGTTGATG
ACGGCGCACG CTGCCGTCGA GCGTGCGGTC GAGGCCATGC GCCAAGGCGC CGTCGACTAC
CTGGTCAAAC CGTTCGAGCC CAAGGCGCTG CTCAGCCTCG TGGAGCGGCA TGCCGCCGGG
CGTGTGACCG GCGAAGAGGG GCCGGTGGCC TGCGAGCCGG CCAGCCGCCA ATTGCTGGAA
CTGGCGGCCC GTGTGGCGCG CAGTGACTCG ACCGTGCTGA TTTCCGGCGA GTCCGGTACT
GGCAAGGAAG TGCTGGCGCG CTACATTCAC CAGCAGTCGC CGCGTGCGGC GCAGCCCTTC
GTGGCGATCA ACTGCGCGGC GATCCCCGAT AACATGCTCG AGGCCACCCT GTTCGGCCAC
GAGAAGGGTG CCTTCACCGG CGCTATTGCG GCTCAGGCGG GCAAGTTCGA GCAGGCCGAA
GGCGGCACCC TGCTGCTCGA CGAAATCTCG GAAATGCCCA TGGCCTTGCA GGCCAAGCTG
CTGCGTGTGC TGCAGGAGCG CGAGGTGGAG CGGGTAGGCG GGCGCAAGCC GATCAGCCTG
GACATTCGGG TGCTGGCCAC CACCAACCGC GACCTGGCCG GCGAAGTGGC AGCCGGGCGC
TTCCGCGAAG ACCTGTACTA CCGCCTGTCA GTGTTTCCGC TGGCCTGGCG CCCGCTGCGT
GAGCGGCCGG GCGATATCCT GCAGCTGGCT GAGCGCTTGC TGGCGCGCCA TGTGGCCAAG
ATGAAGCACA CCCCGGTGCG CCTCTCGCCA GCGGCTCGGG CCTGCCTGCA AGCCTATGCC
TGGCCGGGCA ACGTGCGCGA ACTGGACAAC GCCCTGCAGC GGGCGTTGAT TCTGCAGCAG
GGTGGCGTGA TCGAGGCGGC GGATTTTTGT CTGGCAGGCG CCATTCCATT GTCAGCTGGC
ACCGAGCCAT CTCTCGACGT GGTTGCTGAT GCCGGCGGGC TGGGGGATGA CATGCGTCGT
CACGAGTACC AGATGATCAT CGACACCCTG CGCGCCGAGC GCGGCCGCCG CAAAGAGGCG
GCCGAACGCC TGGGGATCAG TCCACGTACG TTGCGCTACA AGCTGGCGCA GATGCGCGAT
GCCGGGTTTG ACGTCGAGGC CAGCCTGTTC GGCTGA
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| Protein sequence | MAIKVLLVED DRVLRQALGD TLEIGGFAYQ AVGSAEEALE AVLDDAFSLV VSDVNMPGMD
GHQLLSQLRR QQPQLPVLLM TAHAAVERAV EAMRQGAVDY LVKPFEPKAL LSLVERHAAG
RVTGEEGPVA CEPASRQLLE LAARVARSDS TVLISGESGT GKEVLARYIH QQSPRAAQPF
VAINCAAIPD NMLEATLFGH EKGAFTGAIA AQAGKFEQAE GGTLLLDEIS EMPMALQAKL
LRVLQEREVE RVGGRKPISL DIRVLATTNR DLAGEVAAGR FREDLYYRLS VFPLAWRPLR
ERPGDILQLA ERLLARHVAK MKHTPVRLSP AARACLQAYA WPGNVRELDN ALQRALILQQ
GGVIEAADFC LAGAIPLSAG TEPSLDVVAD AGGLGDDMRR HEYQMIIDTL RAERGRRKEA
AERLGISPRT LRYKLAQMRD AGFDVEASLF G
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