| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1430 |
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| Symbol | |
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| ID | 5192547 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 1604492 |
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| End bp | 1605181 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640585895 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_001266772 |
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| Protein GI | 148546670 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4215] ABC-type arginine transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0905208 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.971438 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGAAAG GCTACGGGGC AGTCATCCTC GACGGGGCGT GGCTGACGCT ACAGCTCGCC
CTGTCGTCGA TGGCCCTGGC CATCGTGCTC GGCCTGATCG GTGTGGCGCT GCGTTTGTCG
CCAGTGCGCT GGCTGGCCTG GCTGGGCGAT CTGTATTCCA CGGTGATCCG TGGTATTCCG
GACCTGGTCC TGATCCTGCT GATCTTCTAC GGCGGGCAAG ACATCATCAA CCGGGTGGCG
CCGCTGCTCG GCTATGAAGA CTATATCGAT CTGAATCCGC TGATTGCGGG TATCGGTACC
CTAGGCTTCA TCTTTGGCGC CTACCTCTCG GAAACCTTCC GCGGGGCCTT CCTGGGCATT
CCCAAAGGCC AGGCCGAGGC GGGCGTGGCG TATGGCATGA GCCCCCGCCA AGTGTTCTTC
CGCATCCAGG TGCCGCAAAT GATTCGCCTG GCCATTCCGG GCTTCACCAA CAACTGGCTG
GTGCTGACCA AGGCCACTGC GCTGATTTCG GTCGTCGGCC TGCAGGACAT GATGTTCAAG
GCCAAGCAGG CGGCTGACGC CACCCGCGAA CCCTTCACCT TCTTCCTGGC AGTGGCGGCG
CTGTACCTGG TGCTGACCAG TGTTTCGCTG CTGGCCCTGA AGTATCTGGA GCGCCGCTAC
TCGGTGGGCG TCAAGGTGGC TGAACTATGA
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| Protein sequence | MLKGYGAVIL DGAWLTLQLA LSSMALAIVL GLIGVALRLS PVRWLAWLGD LYSTVIRGIP
DLVLILLIFY GGQDIINRVA PLLGYEDYID LNPLIAGIGT LGFIFGAYLS ETFRGAFLGI
PKGQAEAGVA YGMSPRQVFF RIQVPQMIRL AIPGFTNNWL VLTKATALIS VVGLQDMMFK
AKQAADATRE PFTFFLAVAA LYLVLTSVSL LALKYLERRY SVGVKVAEL
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