Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_1418 |
Symbol | |
ID | 5193054 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 1585845 |
End bp | 1586729 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640585883 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001266760 |
Protein GI | 148546658 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.380241 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATTACC GCCACCTGAC CCCATCCATG TCACTGCTGC TGGCTTTCGA GGCCGCCGCC CGGCATGAAA GCTACACCCG CGCCGCCGCC GAACTGTCGC TGACCCAAAG CGCGGTCAGC CGCCAGGTGC AAGCCTTGGA GCAGCAGTTG GGCCTGACCC TGTTCCGCCG CGAGGGGCGC CAGGTGCAGC TGACCGATGT CGGCCGCCTG TACCAGCGCG AGCTCAGCGA GGCACTGGGG CGCATCCGCA GCGCCACCTT GCAGGCACTG GCCTATCAGT CGGGGGTAGG CACCTTGCGC CTGGCTACCC TGCCAACCTT CGGCTCGAAA TGGCTGTTGC CGAGGCTGCA TGCGTTCTAC AGCGCTCACC CAGGCATGCT GGTGCACATT CATTCACGCA TTGAAACCAT CAACTTCGAC ACCAGCGAAA TCGATGCCGC CATCGGCGTG GCCAGCCACG ACTTGCCGGG GCTTGTCTGC CATCGCCTGC ATGCCGAGGA GCTGGTGGTG ATCTTGCCGC CGGAGGCCGG CGTCGGCAGC CAAGGCTGGA GCCCGGCGCG GATCAGTGAA GAGGTGCTGC TGAATGTGGC CAACAACCCG CATGCGTGGG GCGAGTGGTT TTCCCATCAT GGCTTGCCGC ATCGGGCGAT GCGGCTGGGG CCGAGTTTCG AGCTGACCTC GCACCTGATC CAGGCGGTAC GTGCCGGGAT CGGGATCGGG CTGGTGCCGC GCATATTGGT GGAGGAGGAA CTGGCCAAGG GCGAGCTGTA CAGCCCTGGT GTGGCGTTTG CCAGCCAGCG TAGTTATTAC CTGATCTACC CGCCGAGGAA TGAGGCGCTG CCGTCGCTGC GGGCATTCAG GGGGTGGTTG CTGGAGCAGA TCTGA
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Protein sequence | MNYRHLTPSM SLLLAFEAAA RHESYTRAAA ELSLTQSAVS RQVQALEQQL GLTLFRREGR QVQLTDVGRL YQRELSEALG RIRSATLQAL AYQSGVGTLR LATLPTFGSK WLLPRLHAFY SAHPGMLVHI HSRIETINFD TSEIDAAIGV ASHDLPGLVC HRLHAEELVV ILPPEAGVGS QGWSPARISE EVLLNVANNP HAWGEWFSHH GLPHRAMRLG PSFELTSHLI QAVRAGIGIG LVPRILVEEE LAKGELYSPG VAFASQRSYY LIYPPRNEAL PSLRAFRGWL LEQI
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