| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1403 |
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| Symbol | |
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| ID | 5195196 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 1571998 |
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| End bp | 1573059 |
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| Gene Length | 1062 bp |
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| Protein Length | 353 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640585868 |
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| Product | helix-turn-helix domain-containing protein |
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| Protein accession | YP_001266745 |
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| Protein GI | 148546643 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.177726 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.519291 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAAA GAACAACGTC AGCCAGTTGG GCATCAGGGA TCGTGAAGGC ACTTGAACTG
GAAGGGCTGG ATTGCAGAGC CATGTTCAAG CAATTGGGGT TGGACTTTGC CGCCCTCGAC
GACCCCGATG CACGTTTTCC GCAAGACTCC ATGACCCGCC TCTGGCAGCT GGCGGTGGAG
CTGTCGGGCA ATGAGGCCAT CGGCCTGAAC ATGGCACGGG TGGTCCGCCC GGCGTCGTTC
CATGTGGTGG GCTATGCGTT GATGTCCAGC CGCACCCTGG CCGAGGGCTT CGAGCGCCTG
GTGCGCTACC AGCGCATCAT CGCCGAAAGC TCCGACCTCA GTTTCGTCCT CGGTCCCGAG
GGTTATTCGC TGATTCTGAC CGTGCACGGT GACCACCTGC CGCCAACCCG GCACAGCGCC
GAAGCGTCGC TGGCCTGTGC GTTGGCGCTG TGCAAATGGC TCAGTGGCCG GCCGGTCCAG
CCGCGGCGGG TACTGGTGCA GGGGCCGCAG CCGAAGAATG TCGAGCCTTA CAAGGTGGCG
TTCCATTCGC CGCTGGTGTT CGGCGCCCCA CATGATGCAC TGGTGTTCGA GCGGGCCGAC
ATGGAGGCGC CGCTGCCGAC CGCGAACGAG GCCATGGCGG TGCTGCACGA CCGGTTTGCC
GGCGAGTACC TGGCACGCTT CTCCGAAAGC CGGGTTAGCC ACCGCGTACG CCAGGTGTTG
TGCCGCATCC TGCCGCAGGG TGAGCCCAAG CGCGAAACCC TGGCCCAGGC CCTGCACCTG
TCGCAGCGCA CCTTGCAACG GCGGCTGCAG GAGGAAGGCA CCAGCTTCCA GACCTTGCTT
GACGACACCC GCCGCGAACT GGCCGAACAA TACCTGGCCC AGCCGGGCAT GACCTTGCTG
GAAACCGCCT ACCTGCTGGG CTTTGCCGAC CCCAGCAACT TCTATCGGGC GTTCCGCCGC
TGGTTCGATG CCACGCCCAG CGAGTACCGC GCCCGCCTGG GCGCGGAAGG CGAAGTGCTC
AGTGACGCCA GAACGCCGGC ATGCACAACA CCAACACCGT GA
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| Protein sequence | MSERTTSASW ASGIVKALEL EGLDCRAMFK QLGLDFAALD DPDARFPQDS MTRLWQLAVE
LSGNEAIGLN MARVVRPASF HVVGYALMSS RTLAEGFERL VRYQRIIAES SDLSFVLGPE
GYSLILTVHG DHLPPTRHSA EASLACALAL CKWLSGRPVQ PRRVLVQGPQ PKNVEPYKVA
FHSPLVFGAP HDALVFERAD MEAPLPTANE AMAVLHDRFA GEYLARFSES RVSHRVRQVL
CRILPQGEPK RETLAQALHL SQRTLQRRLQ EEGTSFQTLL DDTRRELAEQ YLAQPGMTLL
ETAYLLGFAD PSNFYRAFRR WFDATPSEYR ARLGAEGEVL SDARTPACTT PTP
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