Gene Pput_1398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_1398 
Symbol 
ID5193903 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp1568409 
End bp1568690 
Gene Length282 bp 
Protein Length93 aa 
Translation table11 
GC content65% 
IMG OID640585863 
Producthypothetical protein 
Protein accessionYP_001266740 
Protein GI148546638 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3526] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR02174] selT/selW/selH selenoprotein domain 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0987183 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.402606 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGACA ACAAGCCGGA AATCGTCATC ACCTATTGCA CCCAGTGCCA GTGGCTGCTG 
CGTGCGGCCT GGCTGGCTCA GGAACTGCTC AGCACCTTTG CCGACGACCT TGGCCGGGTT
GCTCTGGAGC CGGGCACCGG GGGTGTCTTC CGCATCACCT GCAATGACGT GCAGATCTGG
GAGCGCAAGG CCGACGGCGG TTTCCCCGAG GCGAAGGCAC TGAAGCAGCG GGTGCGCGAC
CTGGTCGACC CGCAGCGTGA CCTTGGTCAC AACGACCGCT GA
 
Protein sequence
MADNKPEIVI TYCTQCQWLL RAAWLAQELL STFADDLGRV ALEPGTGGVF RITCNDVQIW 
ERKADGGFPE AKALKQRVRD LVDPQRDLGH NDR