Gene Pput_1396 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_1396 
Symbol 
ID5194189 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp1565684 
End bp1566121 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content66% 
IMG OID640585861 
ProductMarR family transcriptional regulator 
Protein accessionYP_001266738 
Protein GI148546636 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCTGA ACGACAACCA ACACCGCTTT GGCATGCAAC TGGCCCAGAT GTCCCGAGGT 
TGGCGTGCCG AGCTGGACCG CCGCCTGGCC GGGCTCAACC TGTCCCAGGC GCGCTGGCTG
GTGTTGCTGC ACCTGGCGCG CTTCGAAGAC GCCCCGACCC AGCGTGAGCT GGCCCAGAGC
GTAGGTGTCG AGGGCCCGAC CCTGGCGCGT CTGCTCGACA GCCTGGAAGC GCAAGGGCTG
GTGCGCCGGC AGGCGGTGCT GGAGGATCGG CGGGCGAAGA AGATTGTGCT GTGCCCGCCG
GCCAAGCCGT TGATCGATCA GATCGAGACC ATCGCCAACC AGCTGCGGGT AGAGCTGTTT
ACCGGCGTGG ACGAGGCGGA CTTGCAGGTC TGCATGCGCG TGCATGCCAA GATCCTGGCC
AATCTCGAAA AGTCCTGA
 
Protein sequence
MPLNDNQHRF GMQLAQMSRG WRAELDRRLA GLNLSQARWL VLLHLARFED APTQRELAQS 
VGVEGPTLAR LLDSLEAQGL VRRQAVLEDR RAKKIVLCPP AKPLIDQIET IANQLRVELF
TGVDEADLQV CMRVHAKILA NLEKS