| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1384 |
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| Symbol | |
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| ID | 5192857 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 1551949 |
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| End bp | 1553121 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640585849 |
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| Product | hypothetical protein |
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| Protein accession | YP_001266726 |
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| Protein GI | 148546624 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0951204 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.2451 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCCAC TCATTCAACT GCTCGCCAGC GCCGTGGCGC TGATGATGGC CATGGGCATC
GGTCGTTTCG CCCTCACCCC GCAACTGCCA CAACTGATTG CCGAAGGCCA GTTCGACCTG
ACAGTCGCCG GGCTGGTCGC GGCGGCCAAT TACCTGGGCT ATTTCGTGGG TGCGGTGGAC
GCCATGTTCG CCCGCTCGCC AGGCCAGGTA CGGCTGCGCC TGCACGGGGG GCTGTGGCTG
TGTGTGCTGC TGACCCTGGC CTCCTGGGCT GCCAACGGCT TTTGGGGCCA CCTGCTGCTG
CGCTTCGGCA CAGGCGTAGC CAGCGCCTGG GTGCTGGTGA TGATCACCAG CCTCAGCCAG
CAAGTAGCCA CTGCCCACAA CCGCCAGCGC CTGGGAGCGC TGGTTTTCGC CGGACCCGGC
CTGGGTATTG CCGTGACCGG GCTACTGGCA CTGGCCGCGC ATGTGCAGGG GTTGGGCTCG
GCTGCACTGT GGCTGATCTA TGCCGTGGCT GCCTTGGTGA TGCTGCTGGC CGTGCGGCCG
TGGTTGCCAC GGGCACTGCA AGCGGCACCG GCTCAGCCGC CAGTGCGACA AGGCCCGACG
CGCAGTGTCG GCACTGGCCG CCTGGGGTTG GTGTATGGCT TGTATGGCAT GGGCTACATC
CTGCCAGCCA CCTTTCTGTC ACAGATGGCC AATCAGCAGT TTCGCGGGCA GTGGCTGGCT
GACCTGTTCT GGCCGGCGTT TGGCCTGGCG GCGGCGCTGG GTGTTTTGCT GGTGAGCGTG
CGCCGTGGTG GCCGCACCTC GACCTGGTTG ACCACCACCC TGTGGTTGCA AGGGCTGGGT
GTGCTGGCCT GCCTGATGGG TGGGGGTATC GGGCTGGTGC TGGGTGTTGC GCTGTGTGGC
GGGCCGTTCC TGGCCTGCAT GCAACTGGTC ATGCAGCGCT CGCGCGAGTT GGCGCCACAT
GCCACACAGC GCAATGCCGG GCTGCTGACC GCGTGCTTTG CCTTGGGGCA GTTGAGTGGG
CCGCTGCTGG CGGCGCTCAG CAGCCATTAC AGTGGCGGGC TGCAACCGGC ATTGATGCTG
GCGGCGGGCG GGTTGGCGGT GGCGGGTGTG CTGGTCCAGT TGCCGGGTAA CGCACAGCAG
GGAAGCGCCT GTCAGGCCAA GGCTGCATCC TGA
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| Protein sequence | MSPLIQLLAS AVALMMAMGI GRFALTPQLP QLIAEGQFDL TVAGLVAAAN YLGYFVGAVD
AMFARSPGQV RLRLHGGLWL CVLLTLASWA ANGFWGHLLL RFGTGVASAW VLVMITSLSQ
QVATAHNRQR LGALVFAGPG LGIAVTGLLA LAAHVQGLGS AALWLIYAVA ALVMLLAVRP
WLPRALQAAP AQPPVRQGPT RSVGTGRLGL VYGLYGMGYI LPATFLSQMA NQQFRGQWLA
DLFWPAFGLA AALGVLLVSV RRGGRTSTWL TTTLWLQGLG VLACLMGGGI GLVLGVALCG
GPFLACMQLV MQRSRELAPH ATQRNAGLLT ACFALGQLSG PLLAALSSHY SGGLQPALML
AAGGLAVAGV LVQLPGNAQQ GSACQAKAAS
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