Gene Pput_1300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_1300 
Symbol 
ID5192697 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp1469587 
End bp1470180 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content64% 
IMG OID640585768 
Productnitroreductase 
Protein accessionYP_001266645 
Protein GI148546543 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCCA ACCCCCGCAT TGCCGATTAC GCCATCAACG AGCAGTTCAT CAACCGCTGG 
TCACCACGCG CCTTCACCGC CGAGCCGATC AGCGAAGAAA CCCTGCTGAG CTTCCTCGAG
GCCGCCCGCT GGGCACCGTC GGCCTACAAT TCGCAGCCTT GGCGCTTCCT TTATGCCCGC
CGCGACACGC CGAACTGGGA GCGTTACCTG AGCCTGCTGG TGCCCTTCAA TCGCAGCTGG
GCGCAACAAG CGTCGGCGCT GGTGCTGGTC ATTTCGAAGA CTACCTTCGC GGCCCCGGGC
GCTACGGAAG AAAAACCGGC CCTGTGGCAC ACCTTCGACA CGGGCTCTGC CTGGGGGCAC
CTGGCCCTGC AGGCCAGCAT CAGCGGCTGG CATACCCATG GCATGGCCGG CTTCGATCAG
GACCTGGCAC GTCAGGAACT GAAGATTCCC GAAGGTTACG CACTGCATGC CATGGTGGCG
ATCGGCAAGC TGGGGGACAA GGCCAGCCTG GATGAAGCCC TGCAGGCGCG TGAAGTGCCA
AGCCCGCGCA AGCCGCTGAG CGAGCTGGCT GCTGAAGGCG ATTTCAGCCT GTAA
 
Protein sequence
MSANPRIADY AINEQFINRW SPRAFTAEPI SEETLLSFLE AARWAPSAYN SQPWRFLYAR 
RDTPNWERYL SLLVPFNRSW AQQASALVLV ISKTTFAAPG ATEEKPALWH TFDTGSAWGH
LALQASISGW HTHGMAGFDQ DLARQELKIP EGYALHAMVA IGKLGDKASL DEALQAREVP
SPRKPLSELA AEGDFSL