Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_1300 |
Symbol | |
ID | 5192697 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 1469587 |
End bp | 1470180 |
Gene Length | 594 bp |
Protein Length | 197 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640585768 |
Product | nitroreductase |
Protein accession | YP_001266645 |
Protein GI | 148546543 |
COG category | [C] Energy production and conversion |
COG ID | [COG0778] Nitroreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCCA ACCCCCGCAT TGCCGATTAC GCCATCAACG AGCAGTTCAT CAACCGCTGG TCACCACGCG CCTTCACCGC CGAGCCGATC AGCGAAGAAA CCCTGCTGAG CTTCCTCGAG GCCGCCCGCT GGGCACCGTC GGCCTACAAT TCGCAGCCTT GGCGCTTCCT TTATGCCCGC CGCGACACGC CGAACTGGGA GCGTTACCTG AGCCTGCTGG TGCCCTTCAA TCGCAGCTGG GCGCAACAAG CGTCGGCGCT GGTGCTGGTC ATTTCGAAGA CTACCTTCGC GGCCCCGGGC GCTACGGAAG AAAAACCGGC CCTGTGGCAC ACCTTCGACA CGGGCTCTGC CTGGGGGCAC CTGGCCCTGC AGGCCAGCAT CAGCGGCTGG CATACCCATG GCATGGCCGG CTTCGATCAG GACCTGGCAC GTCAGGAACT GAAGATTCCC GAAGGTTACG CACTGCATGC CATGGTGGCG ATCGGCAAGC TGGGGGACAA GGCCAGCCTG GATGAAGCCC TGCAGGCGCG TGAAGTGCCA AGCCCGCGCA AGCCGCTGAG CGAGCTGGCT GCTGAAGGCG ATTTCAGCCT GTAA
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Protein sequence | MSANPRIADY AINEQFINRW SPRAFTAEPI SEETLLSFLE AARWAPSAYN SQPWRFLYAR RDTPNWERYL SLLVPFNRSW AQQASALVLV ISKTTFAAPG ATEEKPALWH TFDTGSAWGH LALQASISGW HTHGMAGFDQ DLARQELKIP EGYALHAMVA IGKLGDKASL DEALQAREVP SPRKPLSELA AEGDFSL
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