| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1297 |
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| Symbol | |
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| ID | 5194114 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 1467116 |
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| End bp | 1468249 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640585765 |
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| Product | ribonuclease D |
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| Protein accession | YP_001266642 |
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| Protein GI | 148546540 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0349] Ribonuclease D |
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| TIGRFAM ID | [TIGR01388] ribonuclease D |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCCATCG AAATTCACTG GATCCGTGAC GACCAGAGCC TGGCCGAACA CTGCCGCGAC
TGGCACCAGC TGCCCTTCGT CGCCGTCGAC ACCGAATTCA TGCGGGTCGA CACCTTCTAC
CCGAAAGCCG GGCTGATCCA GATCGGCGAC GGCCAACGCG CCTTTCTGAT CGACCCGCTG
CTGATCGGCA ACTGGCAACC CTTGGCCGAC CTGCTGGAAG ACAGCGGTGT GGTCAAGGTG
CTGCACGCCT GCAGCGAAGA CCTTGAAGTG CTGCTGCGCC TGACCGGCAA GCTGCCTCAG
CCGCTGTTCG ACACTCAGCT GGCCGCCGGT TACCTGAACC TGGGCTTCTC CATGGGCTAT
TCGCGGCTGG TGCAGGAAGT GCTGGGCATC GAATTGCCCA AAGGCGAAAC CCGCTCCGAC
TGGCTGCAAC GCCCGCTCTC GGAAACCCAG GTCAGCTACG CTGCCGAAGA TGCCGTGCAC
CTGGCCGAGC TGTTCACCGT GCTGCGCCCG CGGCTGAGTG ACGACAAGTA TGCCTGGGTG
CTGGAAGACG GCGCCGAGCT GGTGGCTGCG TTGCGCCGTG AAGTCGAGCC TGAAAGCCTG
TACCGCGACG TCAAGCTGGC CTGGAAGCTG GCGCCTCAAC AACTGGCAGT GCTACGTGAG
CTGTGCGCCT GGCGCGAGCG CGAAGCGCGC AACCGCGATG TGCCGCGTAA TCGTATCCTC
AAGGAGCACT CGCTGTGGCC CATGGCCAAA AGCCAGCCGA ACAACCTGTC GGCCCTGGCC
AAGATCGACG AGATGCACCC ACGCACCATT CGTCAGGACG GCGAGTGCCT CATCCAGCTG
ATCAAGCGCG CCGCCAGCCT GCCTGCCGAG CAATGGCCAG CGCCCTTGCC CGAGCCGCTG
CCGATCGAGG CTGCGGGCCT TCTCAAGCAG CTGCGTGCCA TCGGCCAGGC CGAAGGCGAG
CGCCTGGGGA TTGCGCCCGA GTTGATGCTG CGCAAGAAAG CCCTGGAGGC GCTGCTCAAG
AGCGGATACC CCAATGGCCC TTATCAACTG CCCGATTCGC TGCGCGGCTG GCGCCGTGAG
CGCATGGGCC AGGCCCTGCT GGACAACCTG GCAGGTGCCG GAGAAACCCG ATGA
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| Protein sequence | MAIEIHWIRD DQSLAEHCRD WHQLPFVAVD TEFMRVDTFY PKAGLIQIGD GQRAFLIDPL
LIGNWQPLAD LLEDSGVVKV LHACSEDLEV LLRLTGKLPQ PLFDTQLAAG YLNLGFSMGY
SRLVQEVLGI ELPKGETRSD WLQRPLSETQ VSYAAEDAVH LAELFTVLRP RLSDDKYAWV
LEDGAELVAA LRREVEPESL YRDVKLAWKL APQQLAVLRE LCAWREREAR NRDVPRNRIL
KEHSLWPMAK SQPNNLSALA KIDEMHPRTI RQDGECLIQL IKRAASLPAE QWPAPLPEPL
PIEAAGLLKQ LRAIGQAEGE RLGIAPELML RKKALEALLK SGYPNGPYQL PDSLRGWRRE
RMGQALLDNL AGAGETR
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