Gene Pput_1269 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_1269 
Symbol 
ID5195033 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp1436097 
End bp1436855 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content64% 
IMG OID640585736 
Productbeta-lactamase domain-containing protein 
Protein accessionYP_001266614 
Protein GI148546512 
COG category[R] General function prediction only 
COG ID[COG1235] Metal-dependent hydrolases of the beta-lactamase superfamily I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.914297 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCTTCG CGGTACTCGG AAGCGGCAGC CAAGGGAACG GCACGCTGAT CGCCAGTGGT 
GACACGTTCA TCCTGGTCGA TTGCGGCTTT TCCCTGCGTG AAACCGAGCG GCGCCTGGCG
CTGCTCGGGG TTTCTGCCGC TCAGCTCAGT GCAGTGCTGG TCACCCACGA ACATGCTGAC
CACGTGCATG GGGTCGGCTT GCTGTCACGG CGCTACAATG TACCGGTCTA CCTCAGCCAA
GGGACTTTGC GCGGCATGCG CAAGCCGGTG GAGGTGGCCG GTTTTCTCGC GTGTGGCCAA
AGCCTGCGTA TCGGCAGCCT GGAAGTAACC GCAGCGCGGG TCGAGCACGA CGCCTACGAG
CCGTTGCAGT ACGTGGTCAG CGACGGCAAG CGGCGCTTTG GCATGCTGAC CGACCTGGGC
TCTTACGACG CGCTGTTGCT GGAGCGTTAC CAGGGCCTGG ATGCACTGCT GATCGAGGCT
AACCACTGCC GCGACCTGCT GGCACGTGGT CACTACCCGG CTTTTCTGAA GCAGCGGGTG
GGTGGCATGC AAGGGCATTT GAACAACCAC CAGGCTGCGC GCCTGGTGCA CGAGTTGGGC
TGGAGCAACC TGCAACACCT GGTGCTGGCC CACCTCAGCA GCAAGAACAA CCTGCCACAC
TTGGCCCGCC AGTGTTTTGT CGACACCCTT GGGTGCGACC CGGACTGGCT CCAGGTGGCG
AATCAGGAAC ACGGGCTCGA CTGGCGCGAA ATCGCCTAG
 
Protein sequence
MRFAVLGSGS QGNGTLIASG DTFILVDCGF SLRETERRLA LLGVSAAQLS AVLVTHEHAD 
HVHGVGLLSR RYNVPVYLSQ GTLRGMRKPV EVAGFLACGQ SLRIGSLEVT AARVEHDAYE
PLQYVVSDGK RRFGMLTDLG SYDALLLERY QGLDALLIEA NHCRDLLARG HYPAFLKQRV
GGMQGHLNNH QAARLVHELG WSNLQHLVLA HLSSKNNLPH LARQCFVDTL GCDPDWLQVA
NQEHGLDWRE IA