Gene Pput_1265 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_1265 
Symbol 
ID5195424 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp1432767 
End bp1433240 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content61% 
IMG OID640585732 
Productalkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 
Protein accessionYP_001266610 
Protein GI148546508 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1225] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.727107 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGTAG CACTCGACCA ACCTGTCGCC GACTTCCAGG CCCAGGCCAC CAGCGGGCAA 
ACCGTCAGCC TTGCCGAACT CAAGGGCCAG CAGGTGGTGG TGTACTTCTA CCCCAAGGAC
AGCACCCCAG GCTGCACCAC CGAGGGCCAG GGCTTCCGCG ACCAGCATGA CGCCTTCGCC
GCGGCCAACA CCGTGGTATT CGGTGTGTCG CGTGATGGCA TCAAGTCGCA CGAGAACTTC
AAGGCCAAGC AAGGTTTCCC GTTCGAGCTG ATCAGCGACA AGGACGAGGC CCTGTGCCAG
CTGTTCGACG TGATCAAGCT GAAGAAGCTG TATGGCAAGG AGTACATGGG CGTTGACCGC
AGCACTTTCC TGATCGACAA GGACGGGGTG CTGCGCCAGG AATGGCGTGG CGTGAAAGTG
CCCGGGCATG TGGATGCCGT ATTGGCGGCC GCCCAAGCCT TGAACAAGGC TTGA
 
Protein sequence
MAVALDQPVA DFQAQATSGQ TVSLAELKGQ QVVVYFYPKD STPGCTTEGQ GFRDQHDAFA 
AANTVVFGVS RDGIKSHENF KAKQGFPFEL ISDKDEALCQ LFDVIKLKKL YGKEYMGVDR
STFLIDKDGV LRQEWRGVKV PGHVDAVLAA AQALNKA