| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1248 |
|---|
| Symbol | |
|---|
| ID | 5191606 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | + |
|---|
| Start bp | 1413715 |
|---|
| End bp | 1414410 |
|---|
| Gene Length | 696 bp |
|---|
| Protein Length | 231 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640585714 |
|---|
| Product | Tol-Pal system, TolQ |
|---|
| Protein accession | YP_001266593 |
|---|
| Protein GI | 148546491 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0811] Biopolymer transport proteins |
|---|
| TIGRFAM ID | [TIGR02796] TolQ protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.216384 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGAAGCTA ACGTCGTCGA CCATACCTCC ATGTGGAGTC TGGTCAGCAA TGCCAGCGTG
GTGGTACAGC TGGTAATGCT GACCCTGGTG GCCGCCTCGG TCACCTCATG GATCATGATC
TTCCAGCGCA GCACCATGCT GCGCGCCGGT CGTCGTGCGC TGGATGCCTT CGAAGAGCGC
TTTTGGTCAG GCATCGACCT GTCCAAGCTG TACCGCCAGG CAGGCAGCAA CCCAGACCCG
GACTCCGGCG TGGAGCAGGT GTTCCGTGCC GGTTTCAAGG AGTTCTCGCG CCTGCGTCAG
CAGCCGGGCG TTGATCCGGA CGCTGTCATG GAAGGTGTTG GCCGTGCCAT GCGTGTGGCC
ATCTCGCGCG AGGAAGAAAA ACTCGAGCAG AGCTTGCCGT TCCTGGCCAC CGTTGGTTCG
ACCAGCCCGT ACATCGGCCT GTTCGGCACC GTATGGGGCA TCATGAACTC CTTCCGCGGT
CTGGCCAGCG CCCAGCAGGC CACCCTGGCC ACCGTTGCTC CGGGCATCGC CGAAGCACTG
ATCGCTACCG CCATCGGCCT GTTCGCGGCA ATCCCGGCTG TCATTGCCTA CAACCGTTTC
GCCGCGCGCA GTGAAGTGCT GATCGGCCGT TACTACACCT TCGCCGACGA GTTCCAGGCG
ATCCTGCACC GCAAAGTGCA CACCAGCGAA GAGTAA
|
|---|
| Protein sequence | MEANVVDHTS MWSLVSNASV VVQLVMLTLV AASVTSWIMI FQRSTMLRAG RRALDAFEER
FWSGIDLSKL YRQAGSNPDP DSGVEQVFRA GFKEFSRLRQ QPGVDPDAVM EGVGRAMRVA
ISREEEKLEQ SLPFLATVGS TSPYIGLFGT VWGIMNSFRG LASAQQATLA TVAPGIAEAL
IATAIGLFAA IPAVIAYNRF AARSEVLIGR YYTFADEFQA ILHRKVHTSE E
|
|---|
| |