Gene Pput_1244 details

Gene Information

• Locus tag: Pput_1244
• Symbol: ruvC
• ID: 5194023
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas putida F1
• Kingdom: Bacteria
• Replicon accession: NC_009512
• Strand: +
• Start bp: 1410840
• End bp: 1411364
• Gene Length: 525 bp
• Protein Length: 174 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 640585710
• Product: Holliday junction resolvase
• Protein accession: YP_001266589
• Protein GI: 148546487
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0817] Holliday junction resolvasome, endonuclease subunit
• TIGRFAM ID: [TIGR00228] crossover junction endodeoxyribonuclease RuvC

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 0.61539
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 23
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGACTCTGA TTCTAGGTAT CGACCCCGGC TCGCGCATCA CCGGCTATGG CGTGGTACGC 
CAGACCGCCC GTGGTTGCGA GTACGTGGCG TCGGGCTGCA TCCGCACCGG CAGCGGTGAG 
CTGCACGAGC GGCTGCAGAT TGTTTTTCGT GGTGTCAGTG AAATCATTGC TCAGCACGGC 
CCGGTGACCA TGGGCATCGA ACGGGTGTTC ATGGCCCGCA ACGCCGATTC GGCGCTCAAG 
CTTGGCCAGG CACGTGGCGC GGCTATCGTC GCCGCCGCCG AGGCTGGCCT GGAGATCGCC 
GAGTACAGCG CCACCCAGGT CAAGCAGGCC GTGGCCGGCA CGGGTGGTGC CAACAAGGAG 
CAGGTGATGA TGATGGTCAT GCACCTGCTG AAATTGACGC AAAAACCGCA GATCGACGCT 
TCCGATGCCC TGGCCATCGC CCTGTGCCAC GCCCACACCC GCTCCAGCCT GGTGCCGCAT 
GGCTTGAGCA CAGCGCGGCG ACGCGGCGGG CGCTTGCGTC TGTAA 

 

Protein sequence

MTLILGIDPG SRITGYGVVR QTARGCEYVA SGCIRTGSGE LHERLQIVFR GVSEIIAQHG 
PVTMGIERVF MARNADSALK LGQARGAAIV AAAEAGLEIA EYSATQVKQA VAGTGGANKE 
QVMMMVMHLL KLTQKPQIDA SDALAIALCH AHTRSSLVPH GLSTARRRGG RLRL