Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_1229 |
Symbol | |
ID | 5195006 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 1392029 |
End bp | 1393939 |
Gene Length | 1911 bp |
Protein Length | 636 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640585692 |
Product | K+ potassium transporter |
Protein accession | YP_001266574 |
Protein GI | 148546472 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3158] K+ transporter |
TIGRFAM ID | [TIGR00794] potassium uptake protein |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.136519 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.564151 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTCAGG CAAGCAGTCA CGCTGAGGGC GGGCACGAGG GGAAGCAGGG TGCGTCACGG TCGGTGGGCC TGCTCGTGGC GGCGGTCGGG GTGGTTTATG GCGATATCGG CACTAGCCCG TTGTATACCC TCAAGGAAGT CTTTACCGGC GGCTACGGGG TGTCGGTCAA CCATGATGGT GTGCTGGGGA TCCTGTCGCT GATCCTTTGG TCGTTGTTGT GGGTGGTCTC GTTCAAGTAC GTGATGTTCA TCTTGCGTGC CGATAACCAG GGGGAGGGCG GCACCATGGC GTTGACCGCT CTGGCGCGGC GGGCCACGGC GGCGTACCCG CGGCTGCGCA CGCTGATGGT GATCTGTGGC TTGATCGGCG CTTCGCTGTT TTATGGCGAC AGCATGATCA CCCCGGCGGT GTCGGTGCTG TCGGCGGTGG AGGGCATGGG CCTGGCCTTC GATGGCATCG ACCACTGGGT GGTGCCAATT TCGCTGGTGG TGCTGGTGGC GCTGTTCCTG GTGCAGCAAC ATGGCACTGA GAAGATCGGC AAGCTGTTTG GTCCGATCAT GGTGACCTGG TTCGTGGCGC TGGGCGCGCT GGGTGTACAT GGCATCTCGC AGAGCCCGGA AGTACTCAAG GCGTTCAACC CGGGCTGGGC AGTCAACTTC TTCGTGGTGC ACCCCGGTAT TGGCGTGGCC ATTCTGGGTG CGGTAGTGCT GGCGCTGACC GGTGCCGAGG CGCTGTACGC CGACATGGGG CACTTTGGCC GCAAGCCGAT TGCCCGGGCC TGGTTCATCC TGGTGCTCCC GGCGCTGGTG CTTAATTATT TTGGCCAGGG TGCACTGCTG CTGCAAAACC CGGAGGCCGC GCGCAACCCG TTCTACCTGC TGGCGCCGGG CTGGGCGCTG CTGCCCTTGG TCGGGCTGGC CACCATGGCC ACGGTTATCG CTTCGCAGGC GGTGATTTCC GGGGCCTTCT CCCTGACCCG TCAGGCCATC CAGCTGGGCT ACATCCCACG TATGCAGATT CAGCACACCT CAAGCGACGA GCAGGGGCAG ATCTACATTG GTGCAGTGAA CTGGACGCTG ATGGTGGGTG TGGTGCTGCT GGTCATCGGC TTCGGGTCCT CGGGCGCTCT GGCGGCAGCC TACGGGGTTG CGGTCACCGG TACCATGCTG ATGACCACCA TCCTGGTGTC CGCGGTGATG CTGCTGCTGT GGAAGTGGCC GCCGCTGCTT GCAGTGCCGA TTCTGGTCGG CTTCCTGTTT GTCGACGGGC TGTTCTTCGC CGCCAATGTG CCGAAAATCG TCCAGGGTGG TGCCTTCCCC GTGTTGGCCG GTGGTGTGCT CTACCTGCTG ATGAGCACCT GGAAGCGCGG CAAGCAGATT CTGGTCGAGC GCATCGATGA AGGTGCCCTG CCATTGCCAT TGTTCATCAG CAGCATCCGC ATTCAGCCAC CGCACCGGGT CGAGGGGACT GCAGTGTTTC TGACGGCACG CTCCGATGCC GTGCCGCATG CGCTGTTGCA CAACATGTTG CACAACCAGG TGTTGCACAG CCAGGTGGTG CTGCTGACTG TGGTCAGCGA AGACCGGCCG CGGGTGCCGG AACATGAGCG TTTCGAGGTG GAAGCCTATG GCGACGGATT CTTCCGTGTG CTGCTGCACT TTGGGTTCAT GGATGAGCCG GACGTGCCTG CCGCGTTGAA GCTGTGTCAT CTGGATGACC TGGACTTCAC GCCCATGCGG ACCACCTACT TCCTCAGCCG CGAGACGGTG ATCGCGTCAC GGTTGGAGGG GATGTCGCGC TGGCGGGGCA ACCTGTTTGC GTTCTTGCTG AAGAATGCCA ACGGCAATCT GCGCTTCTTC AACCTGCCGT TGAACCGGGT GATCGAGCTG GGGACGCAGG TCGAGATCTG A
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Protein sequence | MVQASSHAEG GHEGKQGASR SVGLLVAAVG VVYGDIGTSP LYTLKEVFTG GYGVSVNHDG VLGILSLILW SLLWVVSFKY VMFILRADNQ GEGGTMALTA LARRATAAYP RLRTLMVICG LIGASLFYGD SMITPAVSVL SAVEGMGLAF DGIDHWVVPI SLVVLVALFL VQQHGTEKIG KLFGPIMVTW FVALGALGVH GISQSPEVLK AFNPGWAVNF FVVHPGIGVA ILGAVVLALT GAEALYADMG HFGRKPIARA WFILVLPALV LNYFGQGALL LQNPEAARNP FYLLAPGWAL LPLVGLATMA TVIASQAVIS GAFSLTRQAI QLGYIPRMQI QHTSSDEQGQ IYIGAVNWTL MVGVVLLVIG FGSSGALAAA YGVAVTGTML MTTILVSAVM LLLWKWPPLL AVPILVGFLF VDGLFFAANV PKIVQGGAFP VLAGGVLYLL MSTWKRGKQI LVERIDEGAL PLPLFISSIR IQPPHRVEGT AVFLTARSDA VPHALLHNML HNQVLHSQVV LLTVVSEDRP RVPEHERFEV EAYGDGFFRV LLHFGFMDEP DVPAALKLCH LDDLDFTPMR TTYFLSRETV IASRLEGMSR WRGNLFAFLL KNANGNLRFF NLPLNRVIEL GTQVEI
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