| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1210 |
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| Symbol | |
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| ID | 5195071 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 1370766 |
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| End bp | 1373645 |
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| Gene Length | 2880 bp |
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| Protein Length | 959 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640585673 |
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| Product | ribonucleotide-diphosphate reductase subunit alpha |
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| Protein accession | YP_001266555 |
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| Protein GI | 148546453 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0209] Ribonucleotide reductase, alpha subunit
[COG1328] Oxygen-sensitive ribonucleoside-triphosphate reductase |
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| TIGRFAM ID | [TIGR02506] ribonucleoside-diphosphate reductase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.281558 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.710482 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAACCG ACACAACTCG CGAGAACCCG CAGGCCCAGG TGCCGCAGGC CGCCGATTCC
AACCAGGATC TGGCTGCCAC CGCCCCCGGC CAACTGCGCG TGATCAAGCG TAACGGCACT
GTCGTCCCTT ACACCGACGA CAAGATCACC GTCGCCATCA CCAAGGCGTT CCTCGCAGTT
GAAGGCGGCA CCGCCGCCGC TTCGTCGCGC ATCCACGACA CCGTCGCGCG CCTGACCGAA
CAGGTTACCG CAACGTTCAA GCGTCGCATG CCATCGGGTG GCACCATCCA CATCGAAGAA
ATCCAGGACC AGGTCGAACT GGCCCTGATG CGCGCCGGCG AGCAGAAAGT CGCCCGCGAC
TACGTGATCT ACCGTGACCA GCGCGCCAAG GAGCGTGCCA CTCGCGCCAA CACCGACGCC
GTGGTCGAGC CGCACCCGAG CATCCGCATC ACCCTGGCCG ACGGCAGCCT GGCGCCGCTC
GACATGGCCC GCCTGAACAC CATCATCAGC GAAGCCTGCG AAGGCCTGGC CGAAGTCGAT
GGCGACCTGA TCCAGCGCGA AACCCTGAAG AACCTGTACG ACGGCGTGGC CATCAAGGAC
GTCAACACCG CCCTGGTGAT GACCGCCCGT ACCCTGGTGG AGCGCGAGCC GAACTACTCG
TTCGTTACCG CCCGCCTGCT GATGGACACC CTGCGCGCCG AAGGCCTGGG CTTCCTGAAT
GTAGCCGACA GCGCTACCCA CCACGAGATG GCTGACCTTT ACGCCAAGGC CCTGCCGGCC
TACGTCGCCA AAGGTATCGA GTTCGAGCTG CTGAACCCGG CCCTGGCCGA CTTCGACCTG
GAAAAACTGG GCAAGGCGAT CAACCACGAG CGCGACCAGC AGTTCACCTA CCTGGGCCTG
CAAACCCTGT ACGACCGCTA CTTCATCCAC AAGGATGGCG TGCGCTTCGA GCTGCCGCAG
GTGTTCTTCA TGCGTGTGGC CATGGGCCTG GCGCTGGAAG AGAAGGACAA GGAAGCCCGT
GCGATCGAGT TCTACAACCT GTTGTCGTCG TTCGACTACA TGGCTTCGAC CCCGACCCTG
TTCAACGCCG GTACCCTGCG CCCGCAGCTG TCCAGCTGCT ACCTGACCAC CGTGCCGGAC
GACCTGTCGG GCATCTACCA CGCGATCCAC GACAACGCCA TGCTGTCGAA ATTCGCCGGT
GGCCTGGGCA ACGACTGGAC CCCGGTCCGT GCACTGGGCT CGTACATCAA GGGCACCAAC
GGTAAATCCC AGGGCGTCGT CCCGTTCCTG AAAGTGGTCA ACGACACCGC CGTCGCCGTG
AACCAGGGTG GCAAGCGCAA AGGCGCTGTA TGTGCCTACC TGGAAACCTG GCACCTGGAC
ATCGAAGAAT TCATCGAGCT GCGCAAGAAC ACCGGTGATG ACCGCCGTCG TACCCACGAC
ATGAACACCG CCAACTGGAT CCCTGACCTG TTCATGAAGC GTGTCTTCGA TGACGGCAAG
TGGACCCTGT TCTCGCCTTC GGAAGTGCCA GACCTGCACG ACCTGACCGG CAAGGCCTTC
GAAGAGCGCT ACGAGTACTA CGAAGCCCTG ACCGAGTACA ACAAGATCAA GGTGTTCAAG
ACCATCCAGG CCAAAGACCT GTGGCGCAAG ATGCTGTCGA TGCTGTTCGA GACCGGCCAC
CCATGGCTGA CCTTCAAGGA CCCGTGCAAC CTGCGTTCGC CGCAGCAGCA CGTGGGCGTG
GTCCACAGCT CGAACCTGTG CACCGAAATC ACCCTGAACA CCAACAAGGA CGAGATCGCA
GTCTGCAACC TGGGCTCGAT CAACCTGCCG AACCACATCG TCGACGGCAA GCTGGACACT
GCCAAGCTGC AGCGTACCGT GAACACCGCC GTGCGCATGC TCGACAACGT GATCGACATC
AACTACTACT CGGTGCCGCA AGCGCGTAAC TCGAACTTCA AGCACCGCCC GGTCGGCCTG
GGCATCATGG GCTTCCAGGA CGCGCTGTAC CTGCAGCACA TTCCTTACGG TTCCGATGCA
GCCGTCGAGT TCGCCGACAA GTCGATGGAA GCGGTCAGCT ACTACGCCAT CCAGGCTTCT
TGCGACCTTG CCGATGAACG CGGCGCCTAC GAGACCTTCC AGGGTTCGCT GTGGTCCAAG
GGCATCCTGC CGCTGGATTC GCAACAGATC CTGATCGAGG CCCGTGGCCA GAAGTACATC
GACGTCAACC TGGAAGAAAC CCTGGACTGG GCGCCGGTAC GTGCCCGCGT ACAGAAAGGT
ATTCGTAACT CGAACATCAT GGCCATCGCG CCAACCGCGA CCATCGCCAA CATCACTGGC
GTGTCGCAGT CGATCGAGCC TACCTACCAG AACCTGTACG TGAAATCGAA CCTGTCGGGC
GAATTCACCG TGATCAACCC GTACCTGGTT CGCGACCTCA AGGCCCGCGA CCTGTGGGAC
TCGGTCATGA TCAACGACCT GAAGTACTAC GACGGTTCGG TACAGCAGAT CGAGCGTATC
CCGCAAGAGC TGAAAGACCT GTACGCCACT GCGTTCGAAG TCGAGACCAA GTGGATTGTC
GACGCGGCTT CCCGTCGCCA GAAGTGGATC GACCAGGCGC AGTCGCTGAA CCTGTACATT
GCCGGCGCCT CGGGCAAGAA GCTGGACGTG ACCTACCGCA TGGCTTGGTA CCGTGGCTTG
AAAACCACCT ACTACCTCCG TGCCCTGGCC GCAACCAGCA CCGAGAAGTC GACCATCAAC
ACCGGCAAGC TCAACGCCGT TTCCAGCGGT GGCGACAGCG CCCCGGTCCA GGCAGCCGGC
CCAGCGCCAG TGCCGAAGGC CTGCGCGATC GACGAGCCTG ACTGCGAAGC CTGCCAGTAA
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| Protein sequence | MQTDTTRENP QAQVPQAADS NQDLAATAPG QLRVIKRNGT VVPYTDDKIT VAITKAFLAV
EGGTAAASSR IHDTVARLTE QVTATFKRRM PSGGTIHIEE IQDQVELALM RAGEQKVARD
YVIYRDQRAK ERATRANTDA VVEPHPSIRI TLADGSLAPL DMARLNTIIS EACEGLAEVD
GDLIQRETLK NLYDGVAIKD VNTALVMTAR TLVEREPNYS FVTARLLMDT LRAEGLGFLN
VADSATHHEM ADLYAKALPA YVAKGIEFEL LNPALADFDL EKLGKAINHE RDQQFTYLGL
QTLYDRYFIH KDGVRFELPQ VFFMRVAMGL ALEEKDKEAR AIEFYNLLSS FDYMASTPTL
FNAGTLRPQL SSCYLTTVPD DLSGIYHAIH DNAMLSKFAG GLGNDWTPVR ALGSYIKGTN
GKSQGVVPFL KVVNDTAVAV NQGGKRKGAV CAYLETWHLD IEEFIELRKN TGDDRRRTHD
MNTANWIPDL FMKRVFDDGK WTLFSPSEVP DLHDLTGKAF EERYEYYEAL TEYNKIKVFK
TIQAKDLWRK MLSMLFETGH PWLTFKDPCN LRSPQQHVGV VHSSNLCTEI TLNTNKDEIA
VCNLGSINLP NHIVDGKLDT AKLQRTVNTA VRMLDNVIDI NYYSVPQARN SNFKHRPVGL
GIMGFQDALY LQHIPYGSDA AVEFADKSME AVSYYAIQAS CDLADERGAY ETFQGSLWSK
GILPLDSQQI LIEARGQKYI DVNLEETLDW APVRARVQKG IRNSNIMAIA PTATIANITG
VSQSIEPTYQ NLYVKSNLSG EFTVINPYLV RDLKARDLWD SVMINDLKYY DGSVQQIERI
PQELKDLYAT AFEVETKWIV DAASRRQKWI DQAQSLNLYI AGASGKKLDV TYRMAWYRGL
KTTYYLRALA ATSTEKSTIN TGKLNAVSSG GDSAPVQAAG PAPVPKACAI DEPDCEACQ
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