| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1175 |
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| Symbol | |
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| ID | 5193389 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 1323747 |
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| End bp | 1324862 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640585633 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_001266520 |
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| Protein GI | 148546418 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.343144 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCAAGA TTTCCAAGCT GTTCGCCGCA ATGGTACTGG CCGGGGTAGC CAGCCATTCG
TTTGCCGCCG ATACCATCAA GATCGGCATC GCCGGTCCCA AGACGGGTCC TGTGACCCAG
TACGGCGACA TGCAGTTCAT CGGCGCCAAG CAAGCCATCA AGGATATCAA CGCCGCGGGC
GGCGTGGATG GCAAGATGCT CGAAGCCAAG GAATACGACG ACGCCTGCGA CCCTAAACAG
GCCGTGGCAG TCGCCAACAA AGTGGTCAAC GACGGCGTCA AGTTCGTGGT CGGCCACCTG
TGCTCCAGCT CCACCCAGCC TGCGTCCGAC ATCTACGAAG ACGAAGGCGT GATCATGATC
ACCCCGGCCG CCACTTCGCC GGAAATCACC GCCCGTGGCT ACAAGCTGAT CTTCCGCACC
ATCGGCCTGG ACAGCGCACA GGGCCCGGCC GCCGGCAACT ACATCGCCGA CCACGTCAAG
CCGAAGGTCG TTGCCGTCCT GCACGACAAG CAGCAGTACG GTGAAGGCAT CGCCACCGCC
GTCAAGCAAA CCCTTGAGAA GAAAGGCACC AAGGTTGCCG TCTTTGAAGG CCTGAATGCC
GGTGACAAGG ACTTCTCCTC GATCATCCAG AAGCTCAAGC AGAACAACGT CGACTTCGTC
TACTACGGCG GCTATCACCC AGAGCTGGGC CTGATCCTGC GCCAGGCTCA GGAAAAAGGC
CTGAAAGCCA AGTTCATGGG TCCGGAAGGC GTGGGCAACG ACTCCATTTC GCAGATCGCC
CAGAACGCTT CCGAAGGCCT GCTGGTCACC CTGCCGAAAT CGTTCGACGC AGACCCGGCG
AACAAGAAGA TCGTCGACGC CATCAAGGCT GACGGCAAGG ACCCAAGTGG CCCGTTCGTA
TTCCCTGCCT ACTCGGCTGT CGAGCTGATT GCTCAAGGCA TCAAGAAAGC CGGTTCCGAT
GATACCGACA AGGTGGCCGA GGCCATCCAC AAAGGCACCT TCAAGACCCC GACCGGCGAA
CTGTCGTTCG ACGACAAAGG CGACCTGAAA GACTTCAAGT TCGTGGTCTA CGAATGGCAC
TTCGGCAAGC CGAAGACCGA AGTCTCCCCT CAGTAA
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| Protein sequence | MIKISKLFAA MVLAGVASHS FAADTIKIGI AGPKTGPVTQ YGDMQFIGAK QAIKDINAAG
GVDGKMLEAK EYDDACDPKQ AVAVANKVVN DGVKFVVGHL CSSSTQPASD IYEDEGVIMI
TPAATSPEIT ARGYKLIFRT IGLDSAQGPA AGNYIADHVK PKVVAVLHDK QQYGEGIATA
VKQTLEKKGT KVAVFEGLNA GDKDFSSIIQ KLKQNNVDFV YYGGYHPELG LILRQAQEKG
LKAKFMGPEG VGNDSISQIA QNASEGLLVT LPKSFDADPA NKKIVDAIKA DGKDPSGPFV
FPAYSAVELI AQGIKKAGSD DTDKVAEAIH KGTFKTPTGE LSFDDKGDLK DFKFVVYEWH
FGKPKTEVSP Q
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