Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_1121 |
Symbol | |
ID | 5192681 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 1268818 |
End bp | 1270926 |
Gene Length | 2109 bp |
Protein Length | 702 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640585579 |
Product | molydopterin dinucleotide-binding region |
Protein accession | YP_001266466 |
Protein GI | 148546364 |
COG category | [C] Energy production and conversion |
COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.103516 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAAGA CCCTGCATCA CCGTGCCTGT CACCTGTGCG AAGCGATCTG CGGGCTCAAC ATCGAAGTCA GCCATGAGGA AGACGGGCGG GCCCTGATCA GCTCGATCAA GGGCGACCCC ATGGACCCGT TCAGCCGTGG CCATGTCTGC CCCAAGGCCG TGGCGTTGCA GGACATTCAG AACGACCCGG ATCGCCTGCG CCAGCCCCAT AAGCGGGTCG GCGAGCATTG GCAGGCCATT GGCTGGGATG AGGCTTTCGC ACTGGCAGCC GAAAAATTGT GGGCGGTCCA GCAAGCCCAT GGGCGCAATG CCGTGGCGGT CTACCAAGGC AACCCGAGCG TGCACAATTA CGGCTTGATG ACCCACAGCA ACTACTTTCT GGGCCTGCTC AAGACCCGTA ACCGTTTCTC AGCCACTTCA GTGGACCAGT TGCCCCAACA CCTGGTCAGC CACTTGATGT ATGGGCATGG GCTGCTGCTG CCGATTCCGG ACATCGACCA CACGGGGTTC ATGCTGATTC TTGGCGGCAA CCCGCTGGCC TCCAATGGCA GCATCATGAC TGTTCCGGAC GTGGAGAAGC GCCTGAAGGC CCTGCGGGCG CGTGGTGGGC GCCTGGTGGT GGTTGACCCG CGGCGTAGCG AAACGGCGGC AATGGCTGAC AGCCATTTGT TCATACGCCC CGGTGGTGAT GCAGCCCTGT TGTGCGGCTT GCTCAACACA TTGTTCGAAG AAGGCCTGGC ACGGGGCTCG CACTTGCCGG TCAACGGCCT GCAGCAGGTG CGCGAGGCCA TTGCGCCGTT CAGTGCCGAG GCCGTGAGCG CCCAATGTGG TATTGCTGCA GCGGATATTC GCCAGCTGGC ACGCGACTTC GCTGCTGCCG GGCAGGCCGT GTGCTACGGC CGCATGGGCG TCTCGACCCA AGCATTCGGT ACCCTTTGCC ACTGGCTGGT GCAACTTGTG AACCTGGTGA CCGGCAACCT CGACCGCACA GGCGGCGCAT TGTGCACGGA GCCTGCCGTC GACCTGGTGG CAACCACCTC GGGCGGCCAT TTCAACGCCT GGCAGAGCCG TGTGTCGGGT TTGCCCGAGT ACGGCGGCGA GCTGCCGGTG GCTGCCCTGG CCGAGGAAAT GCAAACACCG GGCGAAGGGC AGGTGCGCGC CCTGGTGACC GTTGCCGGTA ACCCTGTGTT GTCCACGCCT AACGGCCGCC AGCTGGATAC GGCGCTGGAG GGTCTGGAGT TCATGCTCAG TATCGATCTC TACATCAACG AAACCACCCG TCATGCCGAC TTGATCCTGC CCTCCACCTC AGCGCTGGAG AACGACCATT ACGACAGCAC CTTCAACTTG CTGGCAGTGC GCAATGTTAC GCGCTTCAAC CGGGCGATCC TGGCCAAGCC GGAGGGGGCA CTGCATGACT GGGAGATCTT CGTCGGCCTG GCCCAGGCGT TTGCCAAGCG TGCCGAGTTG GCGTTGAAGC CGACCTGGTC GCCTGCGCAG ATGATTGATC AAGCCCTGCG CAAAGGGCGC TATGGTGAAG CAACGCCTTG GCAGCTCTCC CTGGCAACAC TGGACGATCA CCCGCACGGG CTTGACCTGG GGCCGTTACG CAGCAACCTC GCTGGGCGCT TGGCGACCGC CAGCAAGGCT GTCGAAGCAG CCCCTCAGGT CTTGCTGGAC GACTTGCACC GCCTGGCGCG AATGACGCCC CCAGTGCCGG GCGAGCTGCT GCTGATTGGG CGCCGTCATG TGCGCAGCAA CAACTCGTGG ATGCACAACT TCCATCGCCT GGTGAAAGGC AAGCCACGGC ATCAGTTGTT GATGCACCCG CAAGATTTAC AGCAGCGGCA ACTGCAGGAT GGCCAGCGCG TGCGCATCCG TTCGCGTACT GGCTCACTGG AGGTCGAGGT GCAGGCCTGC GAGGACATGA TGCCCGGTGT GGTCAGCTTG CCCCATGGTT ATGGTCATGG TCGTCAGGGC GTGCACCTGC AGATCGCCCA GGCGCAACCC GGCGTGAGTG CCAATGACCT GACCGATGAG CGCTTTCGGG ACCAGGTTTC CGGGAACGCT GCGCTCAATG GCGTACCCGT GCAGGTCGAG GCCGCTTGA
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Protein sequence | MTKTLHHRAC HLCEAICGLN IEVSHEEDGR ALISSIKGDP MDPFSRGHVC PKAVALQDIQ NDPDRLRQPH KRVGEHWQAI GWDEAFALAA EKLWAVQQAH GRNAVAVYQG NPSVHNYGLM THSNYFLGLL KTRNRFSATS VDQLPQHLVS HLMYGHGLLL PIPDIDHTGF MLILGGNPLA SNGSIMTVPD VEKRLKALRA RGGRLVVVDP RRSETAAMAD SHLFIRPGGD AALLCGLLNT LFEEGLARGS HLPVNGLQQV REAIAPFSAE AVSAQCGIAA ADIRQLARDF AAAGQAVCYG RMGVSTQAFG TLCHWLVQLV NLVTGNLDRT GGALCTEPAV DLVATTSGGH FNAWQSRVSG LPEYGGELPV AALAEEMQTP GEGQVRALVT VAGNPVLSTP NGRQLDTALE GLEFMLSIDL YINETTRHAD LILPSTSALE NDHYDSTFNL LAVRNVTRFN RAILAKPEGA LHDWEIFVGL AQAFAKRAEL ALKPTWSPAQ MIDQALRKGR YGEATPWQLS LATLDDHPHG LDLGPLRSNL AGRLATASKA VEAAPQVLLD DLHRLARMTP PVPGELLLIG RRHVRSNNSW MHNFHRLVKG KPRHQLLMHP QDLQQRQLQD GQRVRIRSRT GSLEVEVQAC EDMMPGVVSL PHGYGHGRQG VHLQIAQAQP GVSANDLTDE RFRDQVSGNA ALNGVPVQVE AA
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