Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_1067 |
Symbol | xseA |
ID | 5194413 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 1199816 |
End bp | 1201207 |
Gene Length | 1392 bp |
Protein Length | 463 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640585525 |
Product | exodeoxyribonuclease VII large subunit |
Protein accession | YP_001266412 |
Protein GI | 148546310 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1570] Exonuclease VII, large subunit |
TIGRFAM ID | [TIGR00237] exodeoxyribonuclease VII, large subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGCCTG CCATGATCAA AGACCCTTTC GAACGACTCG GGCTGGACCG CGAGGTCCTT ACCGTCAGCC AACTCAACGG CCGCGCCCGC GTGCTGCTGG AAGACGTTTT CCGCAGCGTG TGGGTGGAAG GCGAAATCTC CAACCTCGCC CGCCCGGCGT CCGGCCACAT GTACTTCACC CTCAAGGACA GCGGCGCCCA GGTGCGTTGC GCGTTGTTCC GGCAGAACGC CACGCGGGTA CGCCAGGCGC TGCGAGACGG CCTGGCGGTG CGGGTGCGCG GCAAGGTTTC GCTGTTCGAG GGACGTGGCG ACTACCAGCT GATTCTCGAC ACCGTCGAGC CCGCCGGTGA TGGCGCGCTG CGCCTGGCTT TCGAGGCCCT GAAGGATAAG CTCGGTGCCG AGGGACTGTT CAGCACCGAA CGAAAGAAGC CACTGCCGGC TCACCCGCAG CGCATCGGCA TCATCACCTC GCCCACTGGC GCGGTGATCC GCGACATCAT CAGTGTGTTC GGCCGCCGTG CCCCGCAGGT GGAGCTGAAC CTGATCCCTA CGGCTGTACA GGGCCGCGAA GCCATCGCGC AGATCGTACG CGCCATCCGC CTGGCCGACA GCCTCGGCTT CGATGCGCTG ATTCTGGCGC GTGGTGGTGG TTCGCTGGAA GACCTGTGGT GTTTCAACGA GGAAGCCGTG GCGCGTGCCG TGGCCGCCTG CGTCACGCCA ATTGTCAGCG CCGTGGGCCA TGAAACCGAC GTGTCGATCA GCGACTTCGT GGCTGACGTG CGCGCGCCCA GCCCGTCGGC TGCCGCCGAG CTGCTGGCCC CTGACAACAG CGGCCTTCGG CAACGCCTGG ATGGCCTGCA ACGGCGCCTG CTGCTGCGCA TGCAGAACCG CCTGACCCAC GACCGCCTGC GCCTGGAGTC ACTCACCCGC CGCCTGCGTC ACCCAGGCGA GCGTTTGCGC CAGCAGGCTC AACGCCTGGA CGACCTGGAC ATGCGCCTGC GTCGCGCGTT CATGCTCAAC CTCAACCAGC GCCGCGAACG CCTGGCACGC CTGGACGCCC GCCTGGCCGC GCAGCATCCG GGGCGTAACC TGAAACTGCT GAACCAGCGC CTGGACAGCC TGGCCGAGCG CCTGCCACGG GCCATGCGTG AGGTGCTCAA GGACCGTCGC CAGCGGTTCC AGGCCCAGTT GCAGACACTG CAGGTGGTCA GTCCGCTGGC CACCCTGGCC CGCGGATACA GCATTTTGCT GGATGAACAA GGCCAGGCCA TTCGCAGCGC GGAACAGACC CGCAACGGCC AACGCCTGAC CGCCCGCCTG AACGAAGGCG AGCTGCTGGT GCGGGTCGAA GACAACCACC TGACCCCGGT CACCCTCTCA CTACTGGACT GA
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Protein sequence | MMPAMIKDPF ERLGLDREVL TVSQLNGRAR VLLEDVFRSV WVEGEISNLA RPASGHMYFT LKDSGAQVRC ALFRQNATRV RQALRDGLAV RVRGKVSLFE GRGDYQLILD TVEPAGDGAL RLAFEALKDK LGAEGLFSTE RKKPLPAHPQ RIGIITSPTG AVIRDIISVF GRRAPQVELN LIPTAVQGRE AIAQIVRAIR LADSLGFDAL ILARGGGSLE DLWCFNEEAV ARAVAACVTP IVSAVGHETD VSISDFVADV RAPSPSAAAE LLAPDNSGLR QRLDGLQRRL LLRMQNRLTH DRLRLESLTR RLRHPGERLR QQAQRLDDLD MRLRRAFMLN LNQRRERLAR LDARLAAQHP GRNLKLLNQR LDSLAERLPR AMREVLKDRR QRFQAQLQTL QVVSPLATLA RGYSILLDEQ GQAIRSAEQT RNGQRLTARL NEGELLVRVE DNHLTPVTLS LLD
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