Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_1049 |
Symbol | glk |
ID | 5194306 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 1179719 |
End bp | 1180678 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640585507 |
Product | glucokinase |
Protein accession | YP_001266394 |
Protein GI | 148546292 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0837] Glucokinase |
TIGRFAM ID | [TIGR00749] glucokinase, proteobacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.531529 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCACC TGCTGGTTGG TGATATTGGC GGCACCAATG CCCGTTTTGC GTTGTGGCGT GACAACCAGC TGCATGAGGT AAACGTTTTC GCCACCGCGG ACTACACCAA CCCCGAGCAG GCCATCGAGG CCTACCTGGA AAGCCAAGGT ATCGCCCGTG GTGGCCTGGC GGCGGTGTGC CTGGCGGTGG CCGGCCCGGT CGATGGCGAT GAATTTCGCT TCACCAACAA CCACTGGCGC CTGAGCCGCA CGGCATTTTG CAAGACCTTG GAGGTCGAGC GACTGTTGCT GATCAATGAT TTCACCGCTA TGGCGCTGGG CATGACGCGT CTGCGCGAAG GCGAGTTCCG CGAGGTGTGC CCCGGCCAGG CCGACCCCTC GAGGCCGGCA CTGGTGATCG GGCCAGGTAC TGGCCTGGGT GTGGGCTCGC TGCTGCGTCT GGGCGAACAG CACTGGAAGG CCCTGCCGGG TGAAGGCGGG CATGTTGACC TGCCGGTAGG CAATGCTCGC GAAGCGGCAA TCCACCAGCA GATCCACAGT CAGATCGGCC ATGTCAGCGC CGAGGCCGTT ATCAGTGGGG GGGGGCTGGT GCGGTTGTAC CAGGCGATCT GTGCGCTGGA CGGCGACACG CCCAGGCACA AGACCCCGGC GCATATCACC GACGCCGCAC TGGGCGGTGA GCCACGGGCG CTGGCGGTGG TCGAGCAGTT CTGTCGTTTC CTTGGGCGCG TGGCGGGTAA CAATGTGCTG ACGCTGGGCG CGCGAGGCGG GGTCTATATT GTGGGCGGTG TGATTCCGCG CTTTGCCGAG CTGTTCCTGC GCAGCGGGTT TGCCGCGAGT TTTGCCGACA AGGGGTGTAT GAGTGGCTAT TTCACCGGGG TGCCGGTGTG GCTGGTGACG GCGGAATATT CCGGGTTGGA GGGGGCAGGG GTAGCGTTGC AGCAGGCGTT GGATCACTGA
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Protein sequence | MKHLLVGDIG GTNARFALWR DNQLHEVNVF ATADYTNPEQ AIEAYLESQG IARGGLAAVC LAVAGPVDGD EFRFTNNHWR LSRTAFCKTL EVERLLLIND FTAMALGMTR LREGEFREVC PGQADPSRPA LVIGPGTGLG VGSLLRLGEQ HWKALPGEGG HVDLPVGNAR EAAIHQQIHS QIGHVSAEAV ISGGGLVRLY QAICALDGDT PRHKTPAHIT DAALGGEPRA LAVVEQFCRF LGRVAGNNVL TLGARGGVYI VGGVIPRFAE LFLRSGFAAS FADKGCMSGY FTGVPVWLVT AEYSGLEGAG VALQQALDH
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