| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1047 |
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| Symbol | |
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| ID | 5194539 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 1176630 |
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| End bp | 1177631 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640585505 |
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| Product | glyceraldehyde-3-phosphate dehydrogenase, type I |
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| Protein accession | YP_001266392 |
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| Protein GI | 148546290 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase |
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| TIGRFAM ID | [TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.139028 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCTTC GCATCGCCAT CAATGGATTC GGCCGAATCG GGCGCAACGT CCTGCGCGCA
CTGTATACCC AAGGCTACCG CCAGGACCTG CAGGTCGTCG CCATCAACGA CCTGGGCGAC
AGCGCCATGA ATGCCCACCT GCTCAAGTAC GACAGTGTCC ACGGCACCTT CGACGCGACC
GTCGAGGCCG ACCACGAAAG CCTGACGGTC AACGGTGACC GTATCGCGGT CAGTGCCATT
CGCAATCCGG CCGAACTGCC CTGGAAGGCC GAGGCGATCG ACGTGGTGTT CGAGTGCACC
GGGCTGTTCA CCGACCGCGC CAAAGCCGCT GCGCACCTGG CCGCCGGGGC GGGCAAGGTG
ATTGTCTCGG CTCCGGCCAA GGGTGCCGAT GCCACTGTGG TGTACGGGGT CAACCACGAC
ATCCTGCGGG CCTCGCACCA GGTCATTTCC AATGCGTCCT GCACCACCAA CTGCCTGGCG
CCGATCGCCC AGGTGCTGCA CCGAGAGTTC GGCATCGAGC AAGGCCTGAT GACCACCATC
CACGCCTACA CCAACGACCA GGTGCTGACT GACGTTTACC ACAGCGACCC GTACCGCGCG
CGTTCAGCCA CCCAGTCGAT GATCCCGAGC AAGACCGGTG CCGCCGAGGC CGTGGGCCTG
GTGCTGCCGG AGCTGGCCGG CAAGCTGACC GGCATGGCGG TGCGGGTGCC CGTCATCAAC
GTGTCGTTGG TGGACCTCAC CGTCAACCTC AAGCGCGAGG CCACGGCCGA GCAGGTCAAC
CAGCTGTTCC TCGAGGCCAG CAAGCATTCC AAGGTATTGG GCTACAACGC CCTGCCATTG
GTTTCCTGCG ATTTCAACCA CAACCCGCTG TCGTCGATCT TCGATGCCAA CCATACCCGG
GCCAACGGGC GGATGCTCAA GGTGCTGGCC TGGTATGACA ACGAGTGGGG GTTCAGCAAC
CGGATGCTGG ATAACTGCCT GGCGCTGCAC CGGGCTGGCT GA
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| Protein sequence | MTLRIAINGF GRIGRNVLRA LYTQGYRQDL QVVAINDLGD SAMNAHLLKY DSVHGTFDAT
VEADHESLTV NGDRIAVSAI RNPAELPWKA EAIDVVFECT GLFTDRAKAA AHLAAGAGKV
IVSAPAKGAD ATVVYGVNHD ILRASHQVIS NASCTTNCLA PIAQVLHREF GIEQGLMTTI
HAYTNDQVLT DVYHSDPYRA RSATQSMIPS KTGAAEAVGL VLPELAGKLT GMAVRVPVIN
VSLVDLTVNL KREATAEQVN QLFLEASKHS KVLGYNALPL VSCDFNHNPL SSIFDANHTR
ANGRMLKVLA WYDNEWGFSN RMLDNCLALH RAG
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