| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1040 |
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| Symbol | |
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| ID | 5193530 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 1167944 |
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| End bp | 1169386 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640585498 |
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| Product | arginine/ornithine antiporter |
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| Protein accession | YP_001266385 |
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| Protein GI | 148546283 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | [TIGR00905] transporter, basic amino acid/polyamine antiporter (APA) family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.188854 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGGGA GGCTCATGAG CGAACCGGGA CAGAAGCTGC GCCTGGGCGC GCTGATCGCG
CTGGTGGTCG GGTCGATGAT TGGCGGCGGG ATCTTCTCGC TACCGCAGAA CATGGCCGCG
CGTGCTGATG TGGGTGCAGT GCTGATCGGC TGGGGGATCA CCGCAGTCGG CATGTTGGCC
CTGGCTTTCG TGTTCCAGAC CCTGGCCAAC CGCAAGCCGG AACTGGACTC GGGGGTATAT
GCCTACGCCA AGGCCGGCTT TGGCGAGTAC ATGGGCTTTT CCTCGGCCTG GGGCTACTGG
ATCAGCGCCT GGCTGGGCAA TGTCGGCTAC TTCGTACTGC TGTTCAGCAC CCTGGGTTTC
TACTTCCCGG TGTTCGGCGA AGGCAACACG CCCATCGCCA TCGGTTGTGC CTCGTTGCTG
CTGTGGTCGG TGCACTTCCT GGTACTGCGC GGCATCAAGG AGGCGGCCTT CATCAACCAG
GTCACCACCG TGGCCAAAGT GGTGCCTTTG CTGATTTTCG TGGTGATCGC GGCATTTGCC
TTCCGCGCCG ATATCTTCAC CCGGGATATC TGGGGCTTGA GCAACCCACA ATTCGGCAGC
GTGCTGGAGC AGGTGCGCAA CATGATGCTG GTGACCGTAT TCGTGTTCAT CGGCATAGAG
GGCGCCAGCG TGTATTCCGG GCGCGCCCAG CGTCGGTCAG ACGTGGGCAA GGCCACGGTC
ATCGGTTTTC TAGGTGTGCT GGCGCTGCTG GTGCTGGTCA ACGTGTTGTC GCTGGGCATC
ATGACCCAAC CGGAACTGGC CGGGCTGCAG AACCCCTCAC TGGCTTCGGT GCTGGAGCAT
ATCGTCGGCC CTTGGGGCGC CTTGCTGATC AGCCTCGGCC TGGCGGTTTC GCTGCTTGGC
GCCTTGCTTT CATGGGCGTT GTTGTGTGCC GAAATCCTCT ACGCCACGGC GCGGGACAAG
ACCATGCCGC GCTTTCTGGC CAAGGAAAAC GCCAACCATG TGCCGGCTAA CGCCCTGTGG
CTGACCAACT GCATGATTCA GGGTTTCCTG CTGATTACGC TGTTCTCCGC CGGTACGTAC
ACCAGTCTGA TCTACCTGGC CTCGTCGATG ATCCTGGTGC CCTACCTGTG GTCTGCGGCG
TATGCCGTGC TGCTGGCGAT GCGCGCAGAA ACCTATGCCG GACAGCCGAG GTTGCGGCGC
AAGGACTTGC TGGTGGCGCT GGTTGCCCTG CTGTATGCCG TGTGGCTGCT GTATGCCGGC
GGGCTCAAGT ACCTGCTGCT TTCGGCGCTG CTGTACGCCC CTGGGGTCAT CTTGTTCGCG
AGGGCCAAGC ATGAGCAGGG GCAGACGTTG TTCACGGCCT GGGAAAAACT GATTTTCGCC
GCCGTGCTGG TGGGTGCCGC GCTGGCGGCC TACGCCTTGT ATTCAGGGCT GCTGAGCTTG
TGA
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| Protein sequence | MKGRLMSEPG QKLRLGALIA LVVGSMIGGG IFSLPQNMAA RADVGAVLIG WGITAVGMLA
LAFVFQTLAN RKPELDSGVY AYAKAGFGEY MGFSSAWGYW ISAWLGNVGY FVLLFSTLGF
YFPVFGEGNT PIAIGCASLL LWSVHFLVLR GIKEAAFINQ VTTVAKVVPL LIFVVIAAFA
FRADIFTRDI WGLSNPQFGS VLEQVRNMML VTVFVFIGIE GASVYSGRAQ RRSDVGKATV
IGFLGVLALL VLVNVLSLGI MTQPELAGLQ NPSLASVLEH IVGPWGALLI SLGLAVSLLG
ALLSWALLCA EILYATARDK TMPRFLAKEN ANHVPANALW LTNCMIQGFL LITLFSAGTY
TSLIYLASSM ILVPYLWSAA YAVLLAMRAE TYAGQPRLRR KDLLVALVAL LYAVWLLYAG
GLKYLLLSAL LYAPGVILFA RAKHEQGQTL FTAWEKLIFA AVLVGAALAA YALYSGLLSL
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