Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_1039 |
Symbol | |
ID | 5193085 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 1166095 |
End bp | 1167522 |
Gene Length | 1428 bp |
Protein Length | 475 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640585497 |
Product | arginine/ornithine antiporter |
Protein accession | YP_001266384 |
Protein GI | 148546282 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0531] Amino acid transporters |
TIGRFAM ID | [TIGR00905] transporter, basic amino acid/polyamine antiporter (APA) family |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.808656 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGATT CATCCGGAAA ACTAAAGCTC GGCGCATTAG TTGCACTTGT CGTCGGCTCG ATGATTGGCG GCGGGATCTT CTCGCTGCCG CAAAACATGG CCGCCAGCGC AGGGGTTGGG GCCGTGCTGA TCGGTTGGGG GATCACCGCG GTCGGCATGC TGACCCTGGC TTTCGTGTTC CAGACCCTGG CCAACCGCAA GCCCGACCTG GATGGTGGGG TGTATGCGTA TGCCAAGGCT GGCTTCGGCG ACTACATGGG CTTTTCCTCG GCCTGGGGCT ACTGGATCAG TGCCTGGCTG GGCAACGTCG GCTACTTCGT GCTGCTGTTC AGCACCCTGG GTTACTTCTT CCCGATCTTC GGTGAAGGCA ACACCCCAGC CGCCATCATT GGCGCGTCGA TCCTGTTGTG GGCGGTGCAC TTTCTGGTAC TGCGCGGCAT CAAGGAGGCA GCCTTCATCA ACCTGGTCAC CACTGTGGCC AAAGTGGTGC CGCTGGTGCT GTTCGCCCTG ATCTGCCTGT TCGCCTTCAG GCTCGACATC TTCACCGCCG ATATCTGGGC CGTAGGCACG CCAGAGCTTG GCAGTGTCAT GAACCAGGTG CGCAACATGA TGCTGGTCAC CGTGTGGGTG TTCATTGGCA TCGAGGGCGC GAGCATCTTC TCGGCGCGGG CGGAAAAACG CACCGACGTG GGCAAGGCAA CGGTGATCGG CTTCGTGACC GTGCTGCTGT TCCTGGTGTT GGTCAACGTG CTGTCGCTGG GCATCATGAC TCAACCGGAA CTGGCCAAGC TGCAGAACCC ATCGATGGCT GCCGTGCTGG AGCATGTGGT CGGCCACTGG GGGGCGGTGC TGATCAGCGT CGGCCTGGTC ATCTCGCTGC TCGGGGCGCT GCTGTCGTGG GTGCTGTTGT GCGCCGAGAT CATGTTCGCC GCAGCCAAGG ACCACACCAT GCCGGAGTTC CTGCGCCGCG AGAACGCCAA ACAGGTACCG GCCAACGCCC TGTGGCTGAC CAACGCCATG GTGCAGATCT TTCTGGTCAT CACGCTGTTC TCAAGCAGCA CCTACCTGTC TCTGATCTAC CTCGCCACCT CGATGATCCT GGTGCCCTAC CTGTGGTCGG CAGCCTATGC GTTCCTGCTG GCACTGCGCA GCGAAACCTA CGAGCAGGCC CTGGCCGAAC GCAAAAAGGA CCTGATCATC GGTGGTATCG CCCTGCTGTA CGCCATCTGG CTGCTGTACG CCGGCGGCGT GAAATACCTG CTGCTCTCTG CCCTGCTCTA CGCACCTGGC GCCATCCTGT TCGCCAAGGC CAAGCGTGAG GTGGGCAAAC CGGTCTTCAC CAACGTGGAA AAACTGATCT TCGCAGCCGT GGTCATTGGC GCCCTGGTGG CAGCCTTTGG CCTGTATGAC GGCTTCCTGA CCCTTTGA
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Protein sequence | MSDSSGKLKL GALVALVVGS MIGGGIFSLP QNMAASAGVG AVLIGWGITA VGMLTLAFVF QTLANRKPDL DGGVYAYAKA GFGDYMGFSS AWGYWISAWL GNVGYFVLLF STLGYFFPIF GEGNTPAAII GASILLWAVH FLVLRGIKEA AFINLVTTVA KVVPLVLFAL ICLFAFRLDI FTADIWAVGT PELGSVMNQV RNMMLVTVWV FIGIEGASIF SARAEKRTDV GKATVIGFVT VLLFLVLVNV LSLGIMTQPE LAKLQNPSMA AVLEHVVGHW GAVLISVGLV ISLLGALLSW VLLCAEIMFA AAKDHTMPEF LRRENAKQVP ANALWLTNAM VQIFLVITLF SSSTYLSLIY LATSMILVPY LWSAAYAFLL ALRSETYEQA LAERKKDLII GGIALLYAIW LLYAGGVKYL LLSALLYAPG AILFAKAKRE VGKPVFTNVE KLIFAAVVIG ALVAAFGLYD GFLTL
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