| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1024 |
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| Symbol | |
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| ID | 5194673 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 1150286 |
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| End bp | 1151662 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640585482 |
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| Product | L-serine dehydratase 1 |
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| Protein accession | YP_001266369 |
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| Protein GI | 148546267 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1760] L-serine deaminase |
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| TIGRFAM ID | [TIGR00720] L-serine dehydratase, iron-sulfur-dependent, single chain form |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.846352 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCACTGA GCGTCTTCGA CCTGTTCAAG ATCGGCATCG GCCCCTCCAG CTCCCACACG
GTCGGCCCGA TGCGCGCCGC TGCGCGGTTT GCCGAAGGGC TGCGCCGTGA CGGCCTGCTG
GCCCGCACCG CCAGCGTCAA AGCCGAGCTG TATGGCTCAC TGGGCGCCAC AGGCAAAGGC
CACGGCAGTG ACAAAGCCGT GCTGCTGGGC CTTGAAGGCG AACACCCGGA CATTATCGAC
ACCGACAGCA TTCCCGCCCG CCTGCAGGTC ATCCGCGACA GCGGACGCAT CAACCTGCTG
GGCGAACACA GCATTGCGTT CATCGAAAAG CAGCACCTGG CGATGATCCG CAAGCCGTTG
GACTACCACC CCAACGGCAT GATATTCCGC GCCTTCGACG ACGCAGGCCT GCAAATCCGA
AGCCGCGAGT ATTACTCGGT AGGCGGTGGT TTCGTGGTCG ACGAGGACGC TGCCGGCCAT
GACCGCATCG TCGAAGACAC CACGGTGCTG GCCTATCCGT TCAAGACCGC CAAGGCGCTC
CTCGGCCACT GCACCGCGCA TGACCTGTCG GTGAGCCAGG TCATGCTGGC CAACGAGACC
GCCTGGCGCC CTGAAGCAGA AACCCGAGCC GGGCTGCTGC GCATCTGGCA GGTGATGCAA
GATTGCGTCG CGGCAGGTTG CCAGCATGAG GGCATATTAC CGGGAGGGCT CAAGGTCAAA
CGCCGCGCAC CGGCCCTGTA CCGCCAACTG AGCGGCCACC CGGAAGCCAG CCTGCGTGAT
GCCCTGTCAG TGCTCGACTG GGTCAACCTC TACGCCTTGG CGGTGAACGA GGAAAACGCC
TACGGCGGTC GTGTGGTCAC CGCCCCTACC AATGGTGCAG CGGGCATCGT CCCGGCAGTC
CTTCACTACT ACATGCGCTT CGTCCCCGGT GCCAGCGAGG ACGGGGTGGT GCGCTTTCTG
CTCACCGCCG CAGCCATCGG CATCCTGTAC AAGGAAAACG CCTCCATCTC CGGGGCCGAA
GTGGGCTGTC AGGGCGAGGT CGGCGTTGCC TGTTCGATGG CCGCTGGGGC GCTGTGCGAA
GTGATGGGCG GTAGCGTGCA GCAGGTGGAG AACGCAGCCG AAATAGGCAT GGAACACAAC
CTGGGCCTGA CCTGCGACCC GATAGGCGGC CTCGTACAGG TGCCCTGTAT CGAGCGCAAT
GCCATGGGCT CGGTGAAGGC CATCAACGCG GTACGCATGG CCCTGCGCGG CGACGGGCAG
CACTACGTGT CGCTGGACAA GGTCATCCGC ACCATGCGCC AGACCGGCGC CGACATGAAA
AGCAAATACA AAGAGACCGC CCGTGGCGGC CTGGCCGTCA ACATCATCGA ATGTTGA
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| Protein sequence | MSLSVFDLFK IGIGPSSSHT VGPMRAAARF AEGLRRDGLL ARTASVKAEL YGSLGATGKG
HGSDKAVLLG LEGEHPDIID TDSIPARLQV IRDSGRINLL GEHSIAFIEK QHLAMIRKPL
DYHPNGMIFR AFDDAGLQIR SREYYSVGGG FVVDEDAAGH DRIVEDTTVL AYPFKTAKAL
LGHCTAHDLS VSQVMLANET AWRPEAETRA GLLRIWQVMQ DCVAAGCQHE GILPGGLKVK
RRAPALYRQL SGHPEASLRD ALSVLDWVNL YALAVNEENA YGGRVVTAPT NGAAGIVPAV
LHYYMRFVPG ASEDGVVRFL LTAAAIGILY KENASISGAE VGCQGEVGVA CSMAAGALCE
VMGGSVQQVE NAAEIGMEHN LGLTCDPIGG LVQVPCIERN AMGSVKAINA VRMALRGDGQ
HYVSLDKVIR TMRQTGADMK SKYKETARGG LAVNIIEC
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