Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_0927 |
Symbol | |
ID | 5194495 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 1054339 |
End bp | 1054902 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640585385 |
Product | two component Fis family transcriptional regulator |
Protein accession | YP_001266272 |
Protein GI | 148546170 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG4567] Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGAGCG AAGAAAACCA GGTCGAAAGC GAAGAGCTGC CGCACCTGCT GCTGGTGGAT GACGATGCCA CCTTCACCCG GGTCATGGCC CGGGCCATGA GCCGTCGCGG TTTCCGTGTG AGCACTGCCA GTTCTGCCGA AGAAGGCTTG ATTCTGGCCC AGCAGGACCT GCCGGACTAC GCCACGCTGG ACCTGAAGAT GGATGGCGAC TCCGGCCTGG TGCTGCTGCC CAAGCTGCTG GAACTGGACC CGGAAATGCG CGTGGTGATC CTGACCGGGT ACTCGAGCAT TGCCACCGCA GTGGAGGCGG TCAAGCGCGG TGCCTGCAAC TACCTGTGCA AGCCGGCTGA CGCTGATGAT GTGTTGGCAG CACTGCTGTC GGAGCACACC GACCTGGATA CCCTGGTGCC GGAAAACCCG ATGTCGGTCG ATCGCCTGCA GTGGGAACAC ATCCAGCGCG TGCTGAACGA GCATGAAGGT AATATCTCGG CCACCGCGCG GGCGTTGGGC ATGCACCGAC GGACGTTGCA GCGCAAGCTG CAGAAGCGGC CGGTTCGGCG CTGA
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Protein sequence | MMSEENQVES EELPHLLLVD DDATFTRVMA RAMSRRGFRV STASSAEEGL ILAQQDLPDY ATLDLKMDGD SGLVLLPKLL ELDPEMRVVI LTGYSSIATA VEAVKRGACN YLCKPADADD VLAALLSEHT DLDTLVPENP MSVDRLQWEH IQRVLNEHEG NISATARALG MHRRTLQRKL QKRPVRR
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