Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_0926 |
Symbol | |
ID | 5194494 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 1053086 |
End bp | 1054342 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640585384 |
Product | integral membrane sensor signal transduction histidine kinase |
Protein accession | YP_001266271 |
Protein GI | 148546169 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCGCCG CCGTACAACC GTTGTCCGCT ACCCGCCAGA ACCTCTGGCG CCTGACCGTC ATTCGGGTCT TGGTCCTGGC TGCCCAGGCC GGCTCGGTGG GCGTTGCCTA CTGGACCGAA CTGCTGCCGT TGCCCTGGCT GTCACTGGCC GGCACCTTGG CCTTGTCTTC GTTGCTGTGT GCCTTCACGG CCCTGCGCCT GCGGCTGTCG CTGCCCGTCA CCGAAATGGA GTACGCCCTG CAGCTGGCCT GTGACCTGCT GATCCACAGT GCCTTGCTGT ATTACTCCGG CGGCTCGACC AACCCGTTCG TGTCGTATTA CCTGGTGCCG CTGGCGATTG CCGCGGTGAC CTTGCCGTGG CTGTATTCGC TGATCCTGTC GGGCATTGCG CTGACGGCCT ACAGCTTGCT GCTGGTGCAG TTCTACCCGC TCGAAGGGCT GCCGATGGCG CGGGACAAGA TGCAGGTCTA CGGCATGTGG CTGAGCATTG CCCTGGCGGC GGCTGTGATC ACCTTCTTTG CCGCGCGCAT GGCCGAAGAG CTGCGCCGCC AGGAGCAGCT GCGTTCAGAG CGGCGTGAAG AAAGCCTGCG CGACGAGCAA CTGCTGGCTG TGGCTACCCA GGCCGCCGGT GCCGCCCATG AACTGGGTAC GCCGCTGGCG ACCATGAGCG TGCTGATCAA CGAAATGCGC CAGGACCATA CCGACCCGAT GTTGCAGGAG GACCTGCAGA TCCTCCAGGA CCAGGTAAAG CTGTGCAAAG AGACTTTGCA ACAGCTGGTG CGCGCAGCCG AAGCCAACCG GCGCCTGGCC ATCGTGGAGC AGGATGTGAC CGCCTGGCTG GACGAGGCGC TCAACCGCTG GCACCTGATG CGCCCGGAAG CCAGCTACCG CTTCCAGCGC CTGCGCGACG GCAAGGTGCC GCGTCTGGCG CCGCCGCCAG ACCTGACCCA GGCGTTACTG AATCTGTTGA ACAATGCCGC CGATGCCTGC CCTGATGATC TGGAGGTTCG CCTGGACTGG GACGCCCAGG ACATCGTCAT CAGTATCCAC GACCATGGTC CTGGTGTACC GCCAGCCATT GCCGAAGCCA TTGGCAAACC TTTTATTACC ACCAAGGGCA AAGGCTTCGG CCTGGGCCTG TTCTTGAGCA AGGCCAGCGT GACCCGTGCG GGCGGCTCGG TGAAACTCTA TAGTCATGAA CAGGGTGGCA CCCTGACCGA ACTGCGCCTG CCCTATGGCA AGCGAGGAGA TGAATGA
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Protein sequence | MLAAVQPLSA TRQNLWRLTV IRVLVLAAQA GSVGVAYWTE LLPLPWLSLA GTLALSSLLC AFTALRLRLS LPVTEMEYAL QLACDLLIHS ALLYYSGGST NPFVSYYLVP LAIAAVTLPW LYSLILSGIA LTAYSLLLVQ FYPLEGLPMA RDKMQVYGMW LSIALAAAVI TFFAARMAEE LRRQEQLRSE RREESLRDEQ LLAVATQAAG AAHELGTPLA TMSVLINEMR QDHTDPMLQE DLQILQDQVK LCKETLQQLV RAAEANRRLA IVEQDVTAWL DEALNRWHLM RPEASYRFQR LRDGKVPRLA PPPDLTQALL NLLNNAADAC PDDLEVRLDW DAQDIVISIH DHGPGVPPAI AEAIGKPFIT TKGKGFGLGL FLSKASVTRA GGSVKLYSHE QGGTLTELRL PYGKRGDE
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